Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d20
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 40 0.002
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 40 0.002
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 37 0.015
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 35 0.045
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 35 0.045
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.14
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 33 0.14
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 33 0.18
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 33 0.18
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 33 0.18
Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 32 0.32
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 32 0.32
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 32 0.32
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 32 0.42
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 32 0.42
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 32 0.42
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 29 2.3
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 29 2.3
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.9
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 29 3.9
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 29 3.9
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 29 3.9
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.9
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 28 5.2
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 5.2
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 28 6.9
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 6.9
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 27 9.1
U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription f... 27 9.1
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 27 9.1
AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinate... 27 9.1
AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of s... 27 9.1
AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of s... 27 9.1
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
H G + CCD +P L VTGGED K VW
Sbjct: 185 HDGIILCCDWNPTSDLIVTGGEDLKFKVW 213
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
H G + CCD +P L VTGGED K VW
Sbjct: 185 HDGIILCCDWNPTSDLIVTGGEDLKFKVW 213
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H VFCC+ +P L V+G D+ +W V++G +
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI 206
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H V CC + + +L V+G D+K VW+V+SG +V
Sbjct: 1377 HENVVTCCCISFDERLVVSGARDEKIIVWNVQSGDMV 1413
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
F+ H GSV L N + +TG D +W V +G +
Sbjct: 991 FNDHTGSVVSLQLTSNNQFLITGSGDFVVQMWDVTNGKCI 1030
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHECV 667
H VFCC +P L + G D+ VW ++G V +C+
Sbjct: 296 HTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCV-KCI 335
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H VFCC +P+G L +G D+ +W +G +
Sbjct: 189 HTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTI 225
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 536 FSKHVGSVFCCDLH---PNGKLAVTGGEDDKAYVWSVESGXVV 655
++ H S +C + GK V+G ED K Y+W++++ ++
Sbjct: 313 YTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREIL 355
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +F+ G V C D HPN G +D VW V SG
Sbjct: 468 HPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSG 509
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +F+ G V C D HPN G +D VW V SG
Sbjct: 468 HPLRIFADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSG 509
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H V CC+ G+ VT D A VW VE G VV+
Sbjct: 279 HRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVN 316
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H V CC+ G+ VT D A VW VE G VV+
Sbjct: 277 HRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVN 314
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H SV HP+G +A+TGG D VW + +G +
Sbjct: 337 HSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCI 373
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG----XVVHEC 664
+ S H GSV C L + ++ ++G D VW VE+G ++H C
Sbjct: 257 ILSGHTGSVLC--LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHC 302
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H V C D+ P+ KL VTG D VW ++ G
Sbjct: 585 HSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFG 618
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
++FS H +V C + +G L TGG+D +W +
Sbjct: 97 IMFSGHKKAVNCIEFSSDGLLFATGGKDGVIVLWDI 132
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG----XVVHEC 664
+ S H GSV C L + ++ ++G D VW VE+G ++H C
Sbjct: 257 ILSGHTGSVLC--LQYDNRVIISGSSDATVRVWDVETGECIKTLIHHC 302
>Z72502-4|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
V + G + P+ KL TGGEDD V+SV VV
Sbjct: 342 VMKSYFGGLLTLSWSPDAKLIATGGEDDLLTVYSVAEKRVV 382
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H G V + P+G L +GG+D +A +W + G
Sbjct: 197 HTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEG 230
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGED 613
+H GSV+C +PNG L TG D
Sbjct: 412 QHRGSVYCLSFNPNGDLLATGSND 435
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGED 613
+H GSV+C +PNG L TG D
Sbjct: 678 QHRGSVYCLSFNPNGDLLATGSND 701
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGED 613
+H GSV+C +PNG L TG D
Sbjct: 678 QHRGSVYCLSFNPNGDLLATGSND 701
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 539 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
++H G+++C GKL T G+D VW V S
Sbjct: 614 NEHTGAIWCIKFSICGKLMATAGQDSILRVWVVRS 648
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H + CC + L +TG D +W VESG ++
Sbjct: 155 HTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLI 191
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
+ HVG V C D + + V+ +D K VW
Sbjct: 63 ILKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVW 95
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 539 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
++H G+++C GKL T G+D VW V S
Sbjct: 614 NEHTGAIWCIKFSICGKLMATAGQDSILRVWVVRS 648
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
H + CC + L +TG D +W VESG ++
Sbjct: 155 HTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLI 191
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
+ HVG V C D + + V+ +D K VW
Sbjct: 63 ILKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVW 95
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 521 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
H+ ++ +H+ V D HP+ VTG D VW
Sbjct: 2659 HTNVMIKRHIPGVRRIDSHPHAPFYVTGSSDGSIKVW 2695
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
H+GSV C D HP + ++ G D + ++ ++
Sbjct: 298 HMGSVNCTDFHPKEPIMLSCGSDKRVFLGEID 329
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 637
+V H G ++ P+G T G D K + W+V
Sbjct: 32 MVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNV 67
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H G V+ + G+ V+G D VWS G ++H
Sbjct: 293 HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH 330
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +V C + G + VTG D VW VESG
Sbjct: 335 HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG 366
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 557 VFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHECV 667
+ C +H + + VTG +D+ VW ++ G V++ V
Sbjct: 257 ITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLV 291
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H G V+ + G+ V+G D VWS G ++H
Sbjct: 295 HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH 332
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +V C + G + VTG D VW VESG
Sbjct: 337 HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG 368
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 557 VFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHECV 667
+ C +H + + VTG +D+ VW ++ G V++ V
Sbjct: 259 ITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLV 293
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 545 HVGSVFCCDLHPN-GKLAVTGGEDDKAYVWSVESGXVV 655
H G V + P G+L +GGED +W + +G +
Sbjct: 343 HTGQVRAITVEPERGELLASGGEDGTVRIWMIATGRCI 380
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H G V+ + G+ V+G D VWS G ++H
Sbjct: 295 HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLH 332
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
H +V C + G + VTG D VW VESG
Sbjct: 337 HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG 368
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 557 VFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVHECV 667
+ C +H + + VTG +D+ VW ++ G V++ V
Sbjct: 259 ITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLV 293
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
F+ H G V L P+ + ++G D A +W + G
Sbjct: 180 FTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDG 216
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
F+ H G V L P+ + ++G D A +W + G
Sbjct: 180 FTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDG 216
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES-GXVVHECVN 670
H +V C + +P L V+GG D +W S G E VN
Sbjct: 108 HALAVRCMEFNPMSSLIVSGGWDSSVKLWDARSYGNGAIESVN 150
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
F+ H G V L P+ + ++G D A +W + G
Sbjct: 180 FTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDG 216
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
H+GSV C LHP ++ ++ G D ++ ++
Sbjct: 296 HLGSVNCTALHPTQQILLSAGSDKTIFLGELD 327
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
V S H G V D+ P + +GG D +W + SG
Sbjct: 179 VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASG 216
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
L + H+ SV + P +GGED + W +E V+
Sbjct: 220 LSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVI 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H+ +V +HP+ + VT D A VW + + VH
Sbjct: 267 HLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVH 304
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESG 646
V S H G V D+ P + +GG D +W + SG
Sbjct: 179 VASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASG 216
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 530 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVV 655
L + H+ SV + P +GGED + W +E V+
Sbjct: 220 LSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVI 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H+ +V +HP+ + VT D A VW + + VH
Sbjct: 267 HLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVH 304
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 536 FSKHVGSVFCCDLHPNGKLAVTGGED 613
F H G + HP+G + TGGED
Sbjct: 283 FKGHFGPINTMAWHPSGTIIATGGED 308
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVES 643
H + + P+G L TG ED K +W+ S
Sbjct: 359 HSLRITTAEYSPDGSLMATGAEDGKVKIWNSRS 391
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVW 631
++ H +FC NGK+ +GG+ + +W
Sbjct: 250 LWDHHKFEIFCVKFSRNGKMMASGGKSNSITLW 282
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 545 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGXVVH 658
H +V HPN L ++ ED VW ++ +H
Sbjct: 250 HYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLH 287
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 533 VFSKHVGSVFCCDLHPNGKLAVTGGEDDK--AYVWSVESG 646
V H V C D HP L TG D + +W +SG
Sbjct: 254 VLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSG 293
>U89245-1|AAB49459.1| 612|Caenorhabditis elegans transcription
factor UNC-37 protein.
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
K SV CD+ + L VTG + KA +++VE
Sbjct: 579 KENSSVLSCDISFDDSLIVTGSGEKKATLYAVE 611
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/43 (23%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 545 HVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSVESGXVVHECVN 670
H +V C + +P N ++ +D +W+++ V+ +C+N
Sbjct: 223 HTATVNCVEFNPLNKNEFISCSDDGSLRLWNLDDHKVITKCIN 265
>AF003141-10|AAK21487.1| 612|Caenorhabditis elegans Uncoordinated
protein 37 protein.
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
K SV CD+ + L VTG + KA +++VE
Sbjct: 579 KENSSVLSCDISFDDSLIVTGSGEKKATLYAVE 611
>AF001272-1|AAB84235.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
K SV CD+ + L VTG + KA +++VE
Sbjct: 579 KENSSVLSCDISFDDSLIVTGSGEKKATLYAVE 611
>AF001271-1|AAB84234.1| 612|Caenorhabditis elegans enhancer of
split groucho protein.
Length = 612
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 542 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 640
K SV CD+ + L VTG + KA +++VE
Sbjct: 579 KENSSVLSCDISFDDSLIVTGSGEKKATLYAVE 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,806,509
Number of Sequences: 27780
Number of extensions: 210298
Number of successful extensions: 590
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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