Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d18
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.54 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.95 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   2.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    25   2.2  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   2.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 264 MRGSSSTGVFLEAIDVFADVVGTWMLLKSR 175
           M GS  TG++L   D+   V+G W +L  R
Sbjct: 314 MFGSFRTGLYLPTSDIDLVVIGQWTMLPLR 343


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -3

Query: 558 ITTVPKVSGLYSIAASMLASIFFCLISSAIILCASVSNGSE 436
           I T+P    + +IA S  + + FCL S  ++  A+ ++G++
Sbjct: 342 IKTIPDGHNVTTIAVSGQSLVSFCLASKTLVKEANKNDGND 382


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 360 SKLPVSRASASLGLFCLSNAS*SGLARNISLIMRGSSSTGVFLEAIDV 217
           S+  +++      L CL       L  N+S + RG   TG  L+ I++
Sbjct: 606 SRAQIAKVKLLKELLCLEAKDKEFLLANLSKVARGKDCTGEQLDRIEL 653


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 611 SGAQTTIMSAACAERCN 661
           S   TTI+S A AERCN
Sbjct: 141 STTATTIVSGAMAERCN 157


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +2

Query: 80  SFPVRN--W---PKTIASYVSCNIELPFTALPSGIASLDFSNIQVPTTSANT 220
           ++P RN  W    KT+A+  S  +  PF A+P  ++    SN+++     NT
Sbjct: 161 AYPQRNRQWCDMSKTLAAIFSSYVVCPFLAVPIYLSFSIQSNVELLGCDGNT 212


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 554 QLFQKSLDYIPLQPPCWLLYFFA*FL 477
           +L +  LD I  Q  CWL  F+A FL
Sbjct: 437 ELSKHVLDVIYSQTLCWLGTFYAPFL 462


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 558 ITTVPKVSGLYSIAASMLASIFFCLISSAIIL 463
           I T+P    + +IA S  + + FCL SS  ++
Sbjct: 342 IKTIPDGHNVTAIAVSGQSLVSFCLASSKTLV 373


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,352
Number of Sequences: 2352
Number of extensions: 14413
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)