Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d18
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50068-3|AAD47115.1| 389|Caenorhabditis elegans Hypothetical pr... 77 9e-15
AC006730-3|ABO16463.1| 365|Caenorhabditis elegans Hypothetical ... 32 0.43
U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical pr... 31 0.76
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 30 1.3
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 30 1.3
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 30 1.3
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 30 1.3
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.0
>U50068-3|AAD47115.1| 389|Caenorhabditis elegans Hypothetical
protein C01G5.6 protein.
Length = 389
Score = 77.4 bits (182), Expect = 9e-15
Identities = 41/118 (34%), Positives = 64/118 (54%)
Frame = +2
Query: 323 PRLADALLTGSLDTFAAVLREQILARTERQQQRIRMMNSDPFDTEAQRMIAEEIRQKNIE 502
P L + L T+ + + E + + ++ ++P EA+ + + ++ I+
Sbjct: 167 PELVERFLAKKDMTYKE-FEQMFRSYVEEEVHKEEIIKNNPNSAEAKMFLEAKRNKELID 225
Query: 503 ANMEAAMEYNPETFGTVVMLYINCHVNGFPVKAFIDSGAQTTIMSAACAERCNIMRLV 676
+M ++PE V MLYIN +NG PVKAFIDSGAQ +IMS ACAERC + L+
Sbjct: 226 EQYLHSMTHHPEDMIAVTMLYINLTINGVPVKAFIDSGAQKSIMSMACAERCGLNGLI 283
>AC006730-3|ABO16463.1| 365|Caenorhabditis elegans Hypothetical
protein Y27F2A.5 protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +2
Query: 260 RIIREMFLANPDQLALLKQNNP----RLADALLTGSLDTFAAVLREQILARTERQQQRIR 427
RI ++ L PD NP RL D LLTG LDT + +A Q R
Sbjct: 190 RIPSDIRLTVPDMELFYGYENPYTIWRLIDPLLTGPLDTLEVIGSSLSIAPAIFQNARCL 249
Query: 428 MMNSDPFDTEAQRMIAEEIRQKN 496
+ N +P Q + + + KN
Sbjct: 250 IFNLEPGPYSLQVISHQRVHFKN 272
>U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical
protein B0244.9 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2
Query: 559 HYNCSKSLWIIFHCSLHVGFYIFLPNFFSN 470
HY S +W++F +L++G +FLP +FSN
Sbjct: 73 HY--SYFIWLVF-ATLYMGLIVFLPEYFSN 99
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 413 QQRIRMMNSDPFDT-EAQRMIAEEIRQKNIEANMEAAMEYNPETFGTVVMLYINCHVNGF 589
++++ M N DP+ + E+ ++ ++ + + A F T + NG
Sbjct: 450 RRQLAMQNDDPYSSDESTEALSLSCQKPKEDPTPQQASHSTRHGFITA---QVPIRANGM 506
Query: 590 PVKAFIDSGAQTTIMSAACAERCNIMRL 673
P A ID+GA T+ S + + I +L
Sbjct: 507 PQSALIDTGAHITLASRSVCKILGISQL 534
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 191 IQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNNPRLADALLTGSLDTFA 370
IQ P+ A + N P +E+ + EMF + + L N LAD L++ +D
Sbjct: 377 IQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSESHLESSTNTSLADELISIGIDQSQ 436
Query: 371 AVL 379
+L
Sbjct: 437 EIL 439
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 191 IQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNNPRLADALLTGSLDTFA 370
IQ P+ A + N P +E+ + EMF + + L N LAD L++ +D
Sbjct: 367 IQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSESHLESSTNTSLADELISIGIDQSQ 426
Query: 371 AVL 379
+L
Sbjct: 427 EIL 429
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 191 IQVPTTSANTSMASRNTPVEEDPRIIREMFLANPDQLALLKQNNPRLADALLTGSLDTFA 370
IQ P+ A + N P +E+ + EMF + + L N LAD L++ +D
Sbjct: 367 IQEPSEPATEPIPEPNEPKDEEIQRNEEMFHEDTSESHLESSTNTSLADELISIGIDQSQ 426
Query: 371 AVL 379
+L
Sbjct: 427 EIL 429
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -2
Query: 502 FYIFLPNFFSNHPLCFCVEWVRVHH-----PYSLLLPFSSSQYL 386
F F FFS HP FC++ H+ P SLLL S QY+
Sbjct: 84 FLSFFQLFFSFHPTFFCIQIFIPHNIMGGQPTSLLLLLSLVQYV 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,679,145
Number of Sequences: 27780
Number of extensions: 333372
Number of successful extensions: 1030
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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