Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d15
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 36 0.044
SB_57673| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 30 1.7
SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48) 29 3.8
SB_22195| Best HMM Match : Vicilin_N (HMM E-Value=0.72) 29 5.1
SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15) 29 5.1
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 6.7
SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_15048| Best HMM Match : IMS (HMM E-Value=0) 28 6.7
SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6) 28 8.9
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 8.9
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 35.5 bits (78), Expect = 0.044
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Frame = +1
Query: 178 ERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLLSAKTMPCSLVEKKNILQVA 357
E+L LKKD +L ALGKE+ D+ L A L + K+ + V + + ++
Sbjct: 860 EQLDKLKKDADNKEEQLNALGKESEDK--NKLLEAARLEIEDLKS--AAQVSETTLQRIN 915
Query: 358 FDKLKPYAIREECLFILLKVQNLLCYYLIQLDQFTQASNILKSMEEL-YDKIEKSQTDKF 534
+ + + EE + + C QLD+ ++S K EL Y + + Q++K
Sbjct: 916 NELINTVSEIEEMRVKAEEEKEKSCSLESQLDELKKSSEEEKERMELSYQRELQDQSEKH 975
Query: 535 LDAEDLFTTESIANIKRVNPEKIDKVITNNVQMQAFLYNKLN 660
+ + + N++ EK + + Q+++ N+++
Sbjct: 976 ANEFESLKVQLCRNLENSELEKDEVMKAEMNQLRSIYENQIS 1017
>SB_57673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +1
Query: 166 KSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLLSAKTMPCSLVEKKNI 345
+ + ER++SL+ D+H G +V L ++ R + + ++ L A+ LVE+++I
Sbjct: 406 EKAQERIESLEYDLHRAGETMVELEAKDEVASEREMEREEKIAFLQAELK--KLVEREDI 463
Query: 346 LQVAFDKLKPYAIREECL 399
+ KL+ I EEC+
Sbjct: 464 AEREVQKLQ-RIIDEECI 480
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 472 NILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKRVNPEKIDKVITNNVQM-QAFLY 648
N L ++E LY++IE+ + + + E K V PE DKV+T+N ++
Sbjct: 35 NKLSNIEHLYNEIEEKY--RGIKLQQATIAEKAFEGKIVEPENKDKVLTDNEKIGNQVKQ 92
Query: 649 NKLNCPEKYVLYNHTALRRQLEMKE 723
N L C KY T +++ E KE
Sbjct: 93 NFLEC-TKY----FTEFQKKFEEKE 112
>SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 647
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 166 KSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLLS 303
K E +Q ++KD+ T G +L A+ KENH V ++ L +L+
Sbjct: 529 KRHSESIQHIEKDIFTSGQKLGAVLKENHRIDVIHQQLEEQLGVLA 574
>SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 106 METLDRITTTFENVRNVIKNKSSMERLQSLKKDM-HTLGMELVA--LGKENHDQYVRSLA 276
+E +R+ +E + KNK + + SL D+ H LG EL +G V S A
Sbjct: 137 VELQERVINFYEFIW--FKNKGA--KFSSLFYDIPHCLGGELAMELVGDVLKKVPVLSGA 192
Query: 277 MDAYLSLLSAKTMPCSL 327
D ++ LLSAK PC +
Sbjct: 193 SDPFIRLLSAKAQPCQI 209
>SB_40918| Best HMM Match : DMAP_binding (HMM E-Value=0.48)
Length = 366
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 160 KNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMD 282
KN ERL + LG +L G E H Q+ + +D
Sbjct: 236 KNTECQERLSDNRNSHFALGTDLEPKGSEQHHQFAKKSPLD 276
>SB_22195| Best HMM Match : Vicilin_N (HMM E-Value=0.72)
Length = 263
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 472 NILKSMEELYDKIEKSQTDKFLDAEDLFTTESIANIKRVNPE-KIDKVITNNVQMQAFLY 648
N L+ +L +K+E+ + +KFL +D + E K +N + ++K++ + Q L
Sbjct: 136 NTLQDKSDLEEKVERMEMEKFLSGKDNY-EEIEKQDKEINTDLDLNKMLEFENKYQKVLE 194
Query: 649 NKLNCPEK 672
K EK
Sbjct: 195 EKYEWEEK 202
>SB_23411| Best HMM Match : Glyco_transf_8 (HMM E-Value=8.4e-15)
Length = 582
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 270 SCNGRLFISSFRQNYALLSRRKKEYPSSC-VRQIKTIRNPR 389
SCN R SS + SR ++ PSSC VR + RNPR
Sbjct: 149 SCNVRDSPSSRNPRDSPASRNPRDSPSSCNVRDSPSSRNPR 189
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/84 (23%), Positives = 35/84 (41%)
Frame = +1
Query: 142 NVRNVIKNKSSMERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLLSAKTMPC 321
N + + ++E LKK++ TLG K S +D +S +S+
Sbjct: 533 NTKKSLTKARALENNDKLKKELQTLGHARTDFIKVRSGTNGESELLDVCVSEISSSYHML 592
Query: 322 SLVEKKNILQVAFDKLKPYAIREE 393
V N+L + F K K Y +++
Sbjct: 593 QGVIDVNVLLLEFLKSKSYVAKDK 616
>SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 243 GESRPVREVSCNGRLFISSFRQNYA 317
G P+ +++CNGR+ +S+ N A
Sbjct: 162 GHREPINDIACNGRVLVSAGSDNCA 186
>SB_15048| Best HMM Match : IMS (HMM E-Value=0)
Length = 660
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 178 ERLQSLKKDMHTLGMELVALGKENHDQYVRSLAMDAYLSLLSAKTMPCSLVEKKNI 345
E +++K + LG E + EN D + + + ++ ++T+ C LV+++ I
Sbjct: 463 ESFENVKHVISELGFEEHIISYENEDATTFRINKETPIDIILSETLQCGLVKEQQI 518
>SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6)
Length = 126
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 KSMEELYDKIEKSQTDKFLD-AEDLFTTESIANIKRVNPEKIDKVITNNVQMQA 639
K ++L D + + K + AE+ T E +N+K N E ++KV NN + A
Sbjct: 24 KVKQKLLDMVGTTDIVKDVTMAENTSTPEKQSNVKGNNIEHVEKVTANNEETMA 77
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 622 NVQMQAFLYNKLNCPEKYVLYNHTALRRQLE 714
+ Q F YNKL C +V Y H++ ++E
Sbjct: 1108 SAQNSVFAYNKLGCLYSFVSYYHSSYSARVE 1138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,100,167
Number of Sequences: 59808
Number of extensions: 424854
Number of successful extensions: 1200
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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