Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d14
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0W558 Cluster: Putative uncharacterized protein; n=1; ...    35   0.51 
UniRef50_Q0E662 Cluster: Putative uncharacterized protein; n=2; ...    35   0.67 
UniRef50_Q8I5M6 Cluster: Putative uncharacterized protein; n=4; ...    33   2.7  
UniRef50_Q55C46 Cluster: Putative uncharacterized protein; n=1; ...    32   4.8  
UniRef50_A0EFJ9 Cluster: Chromosome undetermined scaffold_93, wh...    31   8.3  

>UniRef50_A0W558 Cluster: Putative uncharacterized protein; n=1;
           Geobacter lovleyi SZ|Rep: Putative uncharacterized
           protein - Geobacter lovleyi SZ
          Length = 91

 Score = 35.1 bits (77), Expect = 0.51
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 161 ICFAVFFRFFGILHSHKHFIFFRTRSYQQFC 69
           ICF +FFR FG LH   HF+ F    +   C
Sbjct: 36  ICFHLFFRLFGFLHFLDHFLLFHLLVFHLGC 66


>UniRef50_Q0E662 Cluster: Putative uncharacterized protein; n=2;
           Pseudomonas phage phiKMV|Rep: Putative uncharacterized
           protein - Pseudomonas phage LKD16
          Length = 179

 Score = 34.7 bits (76), Expect = 0.67
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 127 MPKKRKKTAKQIWLTMVKTIQQITMMKQTKQLPCLQNQLNRTNL 258
           MPK  ++ A   WLTM   +Q  T  K  K+ P L N+  +T+L
Sbjct: 63  MPKGSRRNALVEWLTMFGKVQVNTDKKTNKEHPFLHNKFGKTDL 106


>UniRef50_Q8I5M6 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2134

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 392 FINTKLY*KTKYITHKYIN-PIYYSFFNKLLRIFG 291
           FI  +LY     I  KY+N P YYS+ NKLL + G
Sbjct: 591 FIKNELY---ILICKKYVNAPFYYSYINKLLNVIG 622


>UniRef50_Q55C46 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 991

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 169 TMVKTIQQITMMKQTKQLPCLQNQLNRTNLPTLEPYLP 282
           T+ + IQQ T+ +Q +Q P  Q Q+    L T +PY P
Sbjct: 517 TLNQPIQQPTLQQQQQQQPLQQLQIQTQQLQTQQPYSP 554


>UniRef50_A0EFJ9 Cluster: Chromosome undetermined scaffold_93, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_93,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 658

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = +1

Query: 139 RKKTAKQIWLTMVKTIQQITMMKQTKQLPCLQNQLNRTNLPTLEPYLPKNLPKILSNLL 315
           + K  K+I LT++  I  ITM+    Q   L+NQLN   + TL+       P I +N L
Sbjct: 541 KAKETKEI-LTILARIYGITMLLNNMQGLLLKNQLNSQQIKTLQDTRESLYPIIRTNAL 598


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,661,984
Number of Sequences: 1657284
Number of extensions: 5049410
Number of successful extensions: 14102
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14092
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)