Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d14
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 30 0.60
SB_34736| Best HMM Match : WCCH (HMM E-Value=6.7) 29 1.1
SB_47639| Best HMM Match : Pox_A32 (HMM E-Value=0.075) 29 1.8
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 28 2.4
SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35) 28 2.4
SB_27320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_59561| Best HMM Match : Pox_A32 (HMM E-Value=0.077) 27 4.3
SB_4109| Best HMM Match : 7tm_1 (HMM E-Value=8.89965e-42) 27 4.3
SB_49967| Best HMM Match : RBM1CTR (HMM E-Value=1.4) 27 5.6
SB_42110| Best HMM Match : Pox_A32 (HMM E-Value=0.034) 27 5.6
SB_7075| Best HMM Match : Hormone_5 (HMM E-Value=2.3) 27 5.6
SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39) 27 5.6
SB_22934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_40483| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_14597| Best HMM Match : SOUL (HMM E-Value=6.5) 27 7.4
SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 26 9.8
SB_16227| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_50010| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092) 26 9.8
SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84) 26 9.8
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 30.3 bits (65), Expect = 0.60
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L + +P L LPKNLPK L+N +KN
Sbjct: 1282 LKKVLVPNLTNNLPKNLPKNLANGIKN 1308
>SB_34736| Best HMM Match : WCCH (HMM E-Value=6.7)
Length = 239
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 217 QLPCLQNQLNRTNLPTLEPYLPKNLPKILSNLLKN 321
+L L L +P+L L KNLPK L+N +KN
Sbjct: 75 ELRALWGNLKEVPVPSLTNNLLKNLPKNLANSIKN 109
>SB_47639| Best HMM Match : Pox_A32 (HMM E-Value=0.075)
Length = 911
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 220 LPCLQNQLNRTNLPTLEPYLPKNLPKILSNLLKN 321
+P L+N L +P+L L KNLPK L+N +KN
Sbjct: 548 IPELRN-LKEVLVPSLTNNLLKNLPKNLANSIKN 580
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 208 QTKQLPCLQNQLNR-TNLPTLEPYLPKNLPKILSNLL 315
QTK L+N L + T+LP LEP L P IL +++
Sbjct: 377 QTKAKKALKNILQKCTHLPALEPLLHDAPPNILKHVV 413
>SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35)
Length = 521
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 122 HSHKHFIFFRTRSYQQFCLNPDHYSDINI 36
HSH FF+ RS++ LN +H+++I +
Sbjct: 29 HSHVTCEFFQARSHRLTVLNNEHWAEITL 57
>SB_27320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 217 QLPCLQNQLNRTNLPTLEPYLPKNLPKILSNLLKN 321
+L L L +P+L L KNLPK L+N +KN
Sbjct: 656 ELRTLWMNLKEVLVPSLTNNLLKNLPKNLANSIKN 690
>SB_59561| Best HMM Match : Pox_A32 (HMM E-Value=0.077)
Length = 986
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L + +P L L KNLPK L+N +KN
Sbjct: 623 LKKVPVPNLTNNLLKNLPKNLANSIKN 649
>SB_4109| Best HMM Match : 7tm_1 (HMM E-Value=8.89965e-42)
Length = 331
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 341 INPIYYSFF-NKLLRIFGRFFG-KYGSSVGRFVR 246
+NP+ YSF+ N++ R G+ G +G VG R
Sbjct: 272 VNPLLYSFYSNQMRREIGKLLGCPWGERVGHVTR 305
>SB_49967| Best HMM Match : RBM1CTR (HMM E-Value=1.4)
Length = 334
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 198 LKEVQVPSLTNNLLKNLPKNLANGIKN 224
>SB_42110| Best HMM Match : Pox_A32 (HMM E-Value=0.034)
Length = 720
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 508 LKEVPVPSLTNNLLKNLPKNLANSIKN 534
>SB_7075| Best HMM Match : Hormone_5 (HMM E-Value=2.3)
Length = 1259
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 859 LKEVPVPSLTNNLLKNLPKNLANSIKN 885
>SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39)
Length = 1037
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 736 LKEVPVPSLTNNLLKNLPKNLANSIKN 762
>SB_22934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 126 LKEVPVPSLTNNLLKNLPKNLANSIKN 152
>SB_40483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 154 KQIWLTMVKTIQQITMMKQTKQLPCLQNQLNRTNLP 261
K++W I ++T+ K TKQ N N LP
Sbjct: 9 KRLWHVNASNIGELTLAKTTKQFKEFFNTKNELKLP 44
>SB_27175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 1450 LKEVLVPSLTNNLLKNLPKNLANSIKN 1476
>SB_14597| Best HMM Match : SOUL (HMM E-Value=6.5)
Length = 206
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 139 LKEVLVPSLTNNLLKNLPKNLANSIKN 165
>SB_7014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 26.6 bits (56), Expect = 7.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 151 LKEVLVPSLTNNLLKNLPKNLANSIKN 177
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 205 KQTKQLPCLQNQLNRTNLPTLEPYLPKNLPKILSNL 312
+Q+K+L L+ +LN T +P+ + +L N KILS L
Sbjct: 24 RQSKRLYALK-ELNATAMPSEDRHLALNEVKILSTL 58
>SB_16227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 356 ITHKYINPIYYSFFNK-LLRIFGRFFGK-YGSSVG 258
+ + +NPI Y+ FN+ R FG+ F + Y +G
Sbjct: 143 VLNSTLNPIIYALFNRDFRRAFGKIFARLYSRRLG 177
>SB_10611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 241 LNRTNLPTLEPYLPKNLPKILSNLLKN 321
L +P+L L KNLPK L+N +KN
Sbjct: 401 LKEVPVPSLTNNLLKNLPKNLANGIKN 427
>SB_50010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 356 ITHKYINPIYYSFFNK-LLRIFGRFFGK-YGSSVG 258
+ + +NPI Y+ FN+ R FG+ F + Y +G
Sbjct: 306 VLNSTLNPIIYALFNRDFRRAFGKIFARLYSRRLG 340
>SB_36598| Best HMM Match : E-MAP-115 (HMM E-Value=0.092)
Length = 783
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 216 ATSMFAKSIKSDKSTNARTILAKESSKDSK 305
AT+ S +S++STN + I AKE DS+
Sbjct: 277 ATTNLLPSNQSEQSTNGKAIEAKEVFSDSR 306
>SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84)
Length = 1737
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 128 ILHSHKHFIFFRTRSYQQFCLN 63
+L SHK + F+ SYQQ L+
Sbjct: 1328 LLDSHKRLVLFKDSSYQQTALH 1349
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,808,627
Number of Sequences: 59808
Number of extensions: 159733
Number of successful extensions: 396
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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