Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d13
         (685 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2FBR0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q9HLK6 Cluster: PAGO protein related protein; n=3; Ther...    33   4.9  
UniRef50_Q4J8B4 Cluster: Conserved Archaeal protein; n=2; Sulfol...    33   6.5  
UniRef50_Q11SP1 Cluster: Putative uncharacterized protein; n=3; ...    33   8.6  
UniRef50_Q54W13 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_A7TQ59 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_A3GH59 Cluster: Vacuolar sorting; n=1; Pichia stipitis|...    33   8.6  

>UniRef50_A2FBR0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 615

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 87  ENPVIWYPLFHKTRLKEKKVYAWIQDNFAKFLKGTANNITYNRWYFTEN 233
           +N  I YP  + T++ E  V  W Q  F KF   T N I YN  Y   N
Sbjct: 437 KNGQISYP--YGTKIAEYTVNQWTQIKFEKFFNLTVNGIKYNLSYVNSN 483


>UniRef50_Q9HLK6 Cluster: PAGO protein related protein; n=3;
           Thermoplasma|Rep: PAGO protein related protein -
           Thermoplasma acidophilum
          Length = 285

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = +3

Query: 375 VYAIEYSMVEERVCYAACMDGAIYRIEIPNVVAPIEEPPLFCIRADPALESFNMQFYGSP 554
           VY +  S++  RV YA      I+  +I     P+E   +F +        F + F+G  
Sbjct: 29  VYDVSSSILLMRVLYALVFSAIIFVRQIRFPRTPMEHLKVFVLSNLNITAFFALWFFGET 88

Query: 555 GISSYSTPFITQRSPALSL 611
           G+S+  T  +    P +SL
Sbjct: 89  GVSASLTSIVIYSYPIMSL 107


>UniRef50_Q4J8B4 Cluster: Conserved Archaeal protein; n=2;
           Sulfolobus|Rep: Conserved Archaeal protein - Sulfolobus
           acidocaldarius
          Length = 478

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
 Frame = +3

Query: 15  KHMEEKNEVLSEYIKNIKYHYKNEENPV---IWYP--LFHKTRLKEKKVYAWIQDNFAKF 179
           K+++ K E +S+ ++N      NEE  +   I  P  + +K ++   KVY W++D   +F
Sbjct: 316 KYLQNKLEKVSD-VENPLLLLVNEELSIDGKIDLPNIILYKKKIDVMKVYKWLRDYERQF 374

Query: 180 LKGTANNITY 209
           L+   NNI Y
Sbjct: 375 LQSLPNNIDY 384


>UniRef50_Q11SP1 Cluster: Putative uncharacterized protein; n=3;
           Bacteroidetes|Rep: Putative uncharacterized protein -
           Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 435

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 201 ITYNRWYFTENGYITTLQY 257
           +TYN+WY+T NGY+   QY
Sbjct: 234 LTYNKWYYTLNGYLQFGQY 252


>UniRef50_Q54W13 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 2274

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 78   KNEENPVIWYP-LFHKTRLKEKKVYAWIQDNFAKFLKG 188
            K E N  I Y  L HK  LKE  VY WI  ++ +FL G
Sbjct: 1908 KRERNYAIEYDQLSHKIILKEDLVYCWILFSYYEFLNG 1945


>UniRef50_A7TQ59 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 638

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
 Frame = +3

Query: 12  YKHMEEKNEVLSEYIKNIKYHYKNEENPVIWYP----LFH--KTRLKEKKVYAWIQDNFA 173
           Y  +E   E L  YIKN KYH +N    ++ YP    L+H  K R+K + ++      F 
Sbjct: 23  YIKLEPNEEFL--YIKNSKYHLENGIACILTYPSSLKLYHTFKERIKHENIHNLANHRFV 80

Query: 174 KFLKG 188
             L G
Sbjct: 81  LLLHG 85


>UniRef50_A3GH59 Cluster: Vacuolar sorting; n=1; Pichia stipitis|Rep:
            Vacuolar sorting - Pichia stipitis (Yeast)
          Length = 3109

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 498  CIRADPALESFNMQF---YGSPGISSYSTPFITQRSPALSLGLTADQTKMAVGYGDSSIK 668
            C +    +++F++ F   Y    +    T  I  R PAL L LT  Q K  +   DS +K
Sbjct: 1258 CRQKSKIVDNFDVSFLIDYNETYVKDIPTFIINGRMPALDLNLTELQLKKLLSLSDSVLK 1317

Query: 669  VYD 677
            V++
Sbjct: 1318 VFN 1320


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,336,146
Number of Sequences: 1657284
Number of extensions: 13824621
Number of successful extensions: 36676
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36669
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)