Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d13
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated pro...    31   3.8  
BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated p...    31   3.8  
AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein comp...    31   3.8  
BC025379-1|AAH25379.1|  571|Homo sapiens SPAG16 protein protein.       31   5.0  
AK095036-1|BAC04481.1|  251|Homo sapiens protein ( Homo sapiens ...    31   5.0  
AF490390-1|AAM97147.1|  631|Homo sapiens sperm-associated WD rep...    31   5.0  
AF310672-1|AAM63956.1|  631|Homo sapiens PF20 variant 1a protein.      31   5.0  
AC024246-1|AAY24171.1|  221|Homo sapiens unknown protein.              31   5.0  

>U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated protein
            TP-1 protein.
          Length = 2627

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 594  SPALSLGLTADQTKMAVGYGDSSIKVY 674
            SPALS+ L+ D  ++AVGY    I++Y
Sbjct: 1928 SPALSVALSPDGDRVAVGYRADGIRIY 1954


>BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated
            protein 1 protein.
          Length = 2627

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 594  SPALSLGLTADQTKMAVGYGDSSIKVY 674
            SPALS+ L+ D  ++AVGY    I++Y
Sbjct: 1928 SPALSVALSPDGDRVAVGYRADGIRIY 1954


>AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein component
            1 variant protein.
          Length = 1903

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 594  SPALSLGLTADQTKMAVGYGDSSIKVY 674
            SPALS+ L+ D  ++AVGY    I++Y
Sbjct: 1270 SPALSVALSPDGDRVAVGYRADGIRIY 1296


>BC025379-1|AAH25379.1|  571|Homo sapiens SPAG16 protein protein.
          Length = 571

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   RLRYKHM-EEKNEVLSEYIKNIKYHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKF 179
           R+ +K + +EKN+++++ +K +K HY + E  +      H T LKEK + +  +D     
Sbjct: 136 RMHHKRIVQEKNKLIND-LKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQ 194

Query: 180 LKG 188
           + G
Sbjct: 195 ISG 197


>AK095036-1|BAC04481.1|  251|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37717 fis, clone BRHIP2018998, weakly similar to
           FLAGELLAR WD-REPEAT PROTEIN PF20. ).
          Length = 251

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   RLRYKHM-EEKNEVLSEYIKNIKYHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKF 179
           R+ +K + +EKN+++++ +K +K HY + E  +      H T LKEK + +  +D     
Sbjct: 165 RMHHKRIVQEKNKLIND-LKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQ 223

Query: 180 LKG 188
           + G
Sbjct: 224 ISG 226


>AF490390-1|AAM97147.1|  631|Homo sapiens sperm-associated WD repeat
           protein protein.
          Length = 631

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   RLRYKHM-EEKNEVLSEYIKNIKYHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKF 179
           R+ +K + +EKN+++++ +K +K HY + E  +      H T LKEK + +  +D     
Sbjct: 196 RMHHKRIVQEKNKLIND-LKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQ 254

Query: 180 LKG 188
           + G
Sbjct: 255 ISG 257


>AF310672-1|AAM63956.1|  631|Homo sapiens PF20 variant 1a protein.
          Length = 631

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   RLRYKHM-EEKNEVLSEYIKNIKYHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKF 179
           R+ +K + +EKN+++++ +K +K HY + E  +      H T LKEK + +  +D     
Sbjct: 196 RMHHKRIVQEKNKLIND-LKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQ 254

Query: 180 LKG 188
           + G
Sbjct: 255 ISG 257


>AC024246-1|AAY24171.1|  221|Homo sapiens unknown protein.
          Length = 221

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   RLRYKHM-EEKNEVLSEYIKNIKYHYKNEENPVIWYPLFHKTRLKEKKVYAWIQDNFAKF 179
           R+ +K + +EKN+++++ +K +K HY + E  +      H T LKEK + +  +D     
Sbjct: 103 RMHHKRIVQEKNKLIND-LKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQ 161

Query: 180 LKG 188
           + G
Sbjct: 162 ISG 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,518,773
Number of Sequences: 237096
Number of extensions: 2161037
Number of successful extensions: 4244
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4244
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)