Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d11
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5B057 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  
UniRef50_A6C4N0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaste...    33   8.8  

>UniRef50_A5B057 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 707

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -3

Query: 606 LGTDLLV*CLNEINLKQLKHINYILFGNEVSKIGFCSRCLLIC 478
           LG ++ +   NEIN K+++H+    FGN+  + GF  + LL C
Sbjct: 563 LGKEIFLQPYNEINWKKVRHLCAKTFGNQEWETGFALQPLLAC 605


>UniRef50_A6C4N0 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 231

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 91  NKLQXVMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVYSQV 219
           ++ Q +M      CS C  PCN+  +C PC +GG   T+   V
Sbjct: 55  HRAQRMMKHCCNPCSSC-DPCNTCNSCDPCGAGGFGSTIPGMV 96


>UniRef50_Q8IPJ1 Cluster: CG17377-PC, isoform C; n=6; melanogaster
           subgroup|Rep: CG17377-PC, isoform C - Drosophila
           melanogaster (Fruit fly)
          Length = 287

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
 Frame = +1

Query: 49  VQNKSKMCXRMDAINKLQXVMSAIRGGCSGC-PSPCNSTRNC----TPCCSGGSL 198
           V NK   C    A N        + GGC GC P  CN +  C     PCC   SL
Sbjct: 74  VNNKRMRCAATGAPNGGAGCGGRVAGGCCGCGPCCCNVSPCCGPHSPPCCGSHSL 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,442,906
Number of Sequences: 1657284
Number of extensions: 12073975
Number of successful extensions: 30866
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30807
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)