Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2d11
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.    30   9.1  
U26644-1|AAC50259.1| 2504|Homo sapiens fas protein.                    30   9.1  
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro...    30   9.1  
BC014631-1|AAH14631.1|  774|Homo sapiens FASN protein protein.         30   9.1  
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro...    30   9.1  
AK128489-1|BAC87461.1|  206|Homo sapiens protein ( Homo sapiens ...    30   9.1  
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr...    30   9.1  

>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
          Length = 2509

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106  VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
            V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 1531 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1565


>U26644-1|AAC50259.1| 2504|Homo sapiens fas protein.
          Length = 2504

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106  VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
            V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 1528 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1562


>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
          Length = 2511

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106  VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
            V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 1533 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1567


>BC014631-1|AAH14631.1|  774|Homo sapiens FASN protein protein.
          Length = 774

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
           V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 439 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 473


>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
          Length = 2511

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106  VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
            V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 1533 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1567


>AK128489-1|BAC87461.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46637 fis, clone TRACH3002293. ).
          Length = 206

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -1

Query: 179 HGVQFLVELQGDGHPLQPPRIADITXCNLLIASMRSHILDL 57
           H    L  +   G P  P R   +T C LL+   RSHI  L
Sbjct: 25  HAKVLLGAIASAGQPASPLREVSLTHCPLLLGPSRSHIQGL 65


>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
            protein.
          Length = 2548

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 106  VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 210
            V +  RG  S     C+S R+  P C G  L TVY
Sbjct: 1570 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1604


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,137,588
Number of Sequences: 237096
Number of extensions: 1798801
Number of successful extensions: 4013
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4003
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)