Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d10
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 40 0.002
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 40 0.003
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 33 0.30
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 32 0.40
U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 31 0.69
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 31 0.69
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 31 0.69
AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.91
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical... 31 1.2
AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical ... 31 1.2
AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.2
AC087081-15|AAK66031.1| 267|Caenorhabditis elegans Hypothetical... 30 1.6
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 29 2.8
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical ... 29 2.8
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF038606-9|AAB92027.1| 152|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81072-14|CAN99665.1| 100|Caenorhabditis elegans Hypothetical p... 28 8.5
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 28 8.5
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 28 8.5
U55365-11|AAA98576.2| 357|Caenorhabditis elegans Hypothetical p... 28 8.5
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 28 8.5
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 28 8.5
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 28 8.5
AC087081-11|AAK66034.2| 328|Caenorhabditis elegans Hypothetical... 28 8.5
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 207 TPLESFPTEILSHIFTFLPAKQL-TKCREVCIRWKNVIDTLNKYHSLWYKFCGKDFKNVY 383
T L S P+E+L H+FT+LP +QL T+ VC R+ +++ +K+ S + K
Sbjct: 7 TELISLPSELLCHLFTYLPQRQLITEIPLVCRRFNTILND-DKFWSRRIRTEQKVRLPDC 65
Query: 384 KFAHRLSRPQITWHELYRSLTLWR 455
+ H P+ +++ ++R WR
Sbjct: 66 ELKHPEYEPKKSFYAMHRQRDRWR 89
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3
Query: 189 DNEDEVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLWYKFCGKD 368
+ ED+ + P E+L +F+FLP K L C V R+ + ++ H +W +
Sbjct: 154 EEEDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNS----HEVWKEL---- 205
Query: 369 FKNVYKFAHRLSRPQITWHELYRSLTLWR 455
+ N+Y + L P E +R + WR
Sbjct: 206 YCNLYDYRIPLFHPSHAKFE-FREQSRWR 233
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 216 ESFPTEILSHIFTFLPAKQLTKCREVCIRWK 308
++ P E+L IF LP K +C +VC +W+
Sbjct: 8 KTMPIELLEDIFQRLPVKNKGRCSQVCRQWQ 38
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 32.3 bits (70), Expect = 0.40
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Frame = +3
Query: 225 PTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLWYKFCGKDF-KNVYKFAHRL 401
P ++L+ IF +LP K L C W N + + +W GK + L
Sbjct: 86 PLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDS--DIWQYLLGKKLPEAAVSDPFLL 143
Query: 402 SRPQITWHELYRSLTLWRQLHLARQHYDEFASATT----VASEIQGFRYLRNGTAGVH 563
+ +L W ++R +Y T VA G R R + GVH
Sbjct: 144 AELGSAKKKLRAWYFAWNTSDISRNNYIRTNGFTVHRQPVAQSTDGVRGKRGISKGVH 201
>U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical
protein C07D10.1 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 246 IFTFLPAKQLTKCREVCIRWKNVIDTLNKYHS 341
+F + A L +CR VC +W + I LN+Y S
Sbjct: 16 VFKSVDAATLQRCRRVCTKWNSEILRLNEYTS 47
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 213 LESFPTEILSHIFTFLPAKQLTKCREVCIRWK 308
+E P ++L IF +L KQ+ + VC RW+
Sbjct: 49 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWR 80
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 213 LESFPTEILSHIFTFLPAKQLTKCREVCIRWK 308
+E P ++L IF +L KQ+ + VC RW+
Sbjct: 32 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWR 63
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 213 LESFPTEILSHIFTFLPAKQLTKCREVCIRWK 308
+E P ++L IF +L KQ+ + VC RW+
Sbjct: 66 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRWR 97
>AC006617-4|AAF39771.1| 291|Caenorhabditis elegans Hypothetical
protein C39B5.7 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 225 PTEILSHIFTFLPAKQLTKCREVCIRWKNVID-TLNKYHSLWYKFCGKDF 371
P EI I + LPA L CR+VC ++ +D + N + + + C DF
Sbjct: 2 PLEISDEILSKLPAMDLLSCRKVCKSLRSAVDQSGNHLNRISFDIC-NDF 50
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 114 FKMIFD*INFYIGSDKLAHIIVKMSDNEDEVTPLESFPTEILSHIFTFLP 263
F +F + F+ +D ++ + +D+ + P FPTE HI TFLP
Sbjct: 3 FSFLFILLTFFKTTD--LQVVTQETDDTNYRLPRNVFPTEYRLHITTFLP 50
>AF039042-12|AAC48249.1| 352|Caenorhabditis elegans Hypothetical
protein ZK697.1 protein.
Length = 352
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 370 KSFPQNLYHNEWYLLRVSMTFFQRMQTSRHFVNCFAGRKVKMCDN 236
K FP + HN W L+ + +FF + T + FA R K +N
Sbjct: 28 KFFPTSRCHNVWNLIFIHSSFFNKYSTMEFLI--FAARSYKEHEN 70
>AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical
protein Y82E9BR.12 protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 213 LESFPTEILSHIFTFLPAKQLTKCREVC 296
L PTEIL+ +F L K CR+VC
Sbjct: 105 LSDMPTEILNQVFEKLEPKDRLACRKVC 132
>AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical
protein Y54F10BM.10 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 183 MSDNEDEVTPLESFPTEILSHIFTFLPAKQLTKCREVC 296
MSD T L+ P EI + +F L K+L CR+VC
Sbjct: 1 MSDKRVSPTLLD-LPLEIANKVFEELTLKELLNCRKVC 37
>AC087081-15|AAK66031.1| 267|Caenorhabditis elegans Hypothetical
protein Y82E9BL.4 protein.
Length = 267
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 207 TPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKY 335
+PL + P +I++ +F L L CR VC + +D Y
Sbjct: 24 SPLLNMPLDIVNQVFEKLSPMDLWTCRNVCQSLRRAVDGFGIY 66
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 225 PTEILSHIFTFLPAKQLTKCREVCIRW 305
P E+L +F+FL K L + +VC W
Sbjct: 61 PKEVLLKVFSFLDTKALCRSAQVCRSW 87
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 225 PTEILSHIFTFLPAKQLTKCREVCIRW 305
P E+L +F+FL K L + +VC W
Sbjct: 61 PKEVLLKVFSFLDTKALCRSAQVCRSW 87
>AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical
protein Y27F2A.6 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 43 ESKIPVEICFKILKLHKNYTTLKTS 117
E+K+PV I F I H N+ TL T+
Sbjct: 237 ETKVPVSIYFFIYSSHSNFATLNTA 261
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 277 VNCFAGRKVKMCDNISVGNDSKGVTSSSLSDIFTIMC 167
+N +A + M S+G D GV L D+ T++C
Sbjct: 483 MNAYAAEALYMLVVDSMGEDRFGVVQKDLKDLITLLC 519
>AF038606-9|AAB92027.1| 152|Caenorhabditis elegans Hypothetical
protein C04C3.7 protein.
Length = 152
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +3
Query: 237 LSHIFTFLPAKQLTKCREVCIRWKNVIDTLNK--YHSLWYK---FCGKDFKNVYKFAHRL 401
+ HI + PA + + IRW N +TLN +L Y FCG +K Y+ +L
Sbjct: 9 VDHIKSLFPAN-IPNSTDTFIRWNNAFNTLNMTFVGTLQYSIMIFCG--YKLYYEMEEKL 65
Query: 402 SRPQITWHELYRSL 443
S +L+R +
Sbjct: 66 SIISDDSRKLHRQI 79
>AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical
protein Y119D3A.3 protein.
Length = 310
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 213 LESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKY 335
L P + +H+ L ++L CR+VC + +D L +
Sbjct: 8 LLDLPITVANHVLEKLEIEELLTCRKVCRTLRTAVDKLGAH 48
>Z81072-14|CAN99665.1| 100|Caenorhabditis elegans Hypothetical
protein F30A10.14 protein.
Length = 100
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 179 YNNVCKFITTYIEVYSIENHFEV 111
Y+ VCKF T +EV ++ N F+V
Sbjct: 23 YSQVCKFCTGELEVPTVWNQFQV 45
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 309 SSSGCKLPGISSTVSLVEK*KCAIIFRWET 220
SS G G SS ++LV+ +CA+I+ W T
Sbjct: 579 SSYGIIAIGTSSGLALVDTTQCALIYSWTT 608
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 309 SSSGCKLPGISSTVSLVEK*KCAIIFRWET 220
SS G G SS ++LV+ +CA+I+ W T
Sbjct: 614 SSYGIIAIGTSSGLALVDTTQCALIYSWTT 643
>U55365-11|AAA98576.2| 357|Caenorhabditis elegans Hypothetical
protein C12D5.10 protein.
Length = 357
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 419 SDLRTGEPVSEFVNVFKVLSAKLIP 345
++LR EPVS+F F L AKL+P
Sbjct: 193 NELRCNEPVSQFSLQFVTLFAKLMP 217
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 309 SSSGCKLPGISSTVSLVEK*KCAIIFRWET 220
SS G G SS ++LV+ +CA+I+ W T
Sbjct: 614 SSYGIIAIGTSSGLALVDTTQCALIYSWTT 643
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 309 SSSGCKLPGISSTVSLVEK*KCAIIFRWET 220
SS G G SS ++LV+ +CA+I+ W T
Sbjct: 614 SSYGIIAIGTSSGLALVDTTQCALIYSWTT 643
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 309 SSSGCKLPGISSTVSLVEK*KCAIIFRWET 220
SS G G SS ++LV+ +CA+I+ W T
Sbjct: 614 SSYGIIAIGTSSGLALVDTTQCALIYSWTT 643
>AC087081-11|AAK66034.2| 328|Caenorhabditis elegans Hypothetical
protein Y82E9BL.7 protein.
Length = 328
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 192 NEDEVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVID 320
N + +PL S P ++ + + L L CR VC + +D
Sbjct: 22 NLQQESPLLSIPLDVANQVLEKLEPMDLWTCRNVCQGLRRAVD 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,133,719
Number of Sequences: 27780
Number of extensions: 357551
Number of successful extensions: 1096
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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