Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d09
(712 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3D0 Cluster: CG5818-PA; n=6; Endopterygota|Rep: CG58... 231 1e-59
UniRef50_Q9BYD3 Cluster: Mitochondrial 39S ribosomal protein L4;... 207 2e-52
UniRef50_UPI0000E4A057 Cluster: PREDICTED: similar to mitochondr... 190 2e-47
UniRef50_O17005 Cluster: Putative uncharacterized protein; n=2; ... 166 4e-40
UniRef50_A7RJ96 Cluster: Predicted protein; n=1; Nematostella ve... 144 3e-33
UniRef50_P38516 Cluster: 50S ribosomal protein L4; n=6; Bacteria... 108 2e-22
UniRef50_Q8VY61 Cluster: 50S ribosomal protein L4; n=10; Magnoli... 107 2e-22
UniRef50_Q075M8 Cluster: Plastid 50S ribosomal protein L4 family... 103 3e-21
UniRef50_Q67JU4 Cluster: 50S ribosomal protein L4; n=39; Bacteri... 99 9e-20
UniRef50_Q8ETY1 Cluster: 50S ribosomal protein L4; n=79; Firmicu... 99 1e-19
UniRef50_Q30Z43 Cluster: 50S ribosomal protein L4; n=4; Desulfov... 97 5e-19
UniRef50_Q9ZCQ6 Cluster: 50S ribosomal protein L4; n=10; Rickett... 95 2e-18
UniRef50_Q2LQA0 Cluster: 50S ribosomal protein L4; n=3; Deltapro... 95 2e-18
UniRef50_Q6F1Z3 Cluster: 50S ribosomal protein L4; n=6; Firmicut... 94 3e-18
UniRef50_Q1Q137 Cluster: Strongly similar to 50S ribosomal prote... 94 4e-18
UniRef50_Q00YX6 Cluster: 50S ribosomal protein L4; n=2; Ostreoco... 92 1e-17
UniRef50_P61054 Cluster: 50S ribosomal protein L4; n=25; Firmicu... 92 1e-17
UniRef50_Q6AP70 Cluster: 50S ribosomal protein L4; n=2; Desulfob... 91 2e-17
UniRef50_UPI0000057DE0 Cluster: 50S ribosomal protein L4; n=1; B... 90 6e-17
UniRef50_P61061 Cluster: 50S ribosomal protein L4; n=1; Bdellovi... 89 8e-17
UniRef50_Q28UW1 Cluster: 50S ribosomal protein L4; n=28; Alphapr... 89 1e-16
UniRef50_Q4PHH8 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_Q6KI54 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 88 2e-16
UniRef50_Q2JV82 Cluster: 50S ribosomal protein L4; n=20; Cyanoba... 87 3e-16
UniRef50_Q2JFH5 Cluster: 50S ribosomal protein L4; n=49; Actinob... 87 3e-16
UniRef50_A6GCH8 Cluster: 50S ribosomal protein L4; n=1; Plesiocy... 87 4e-16
UniRef50_Q89J85 Cluster: 50S ribosomal protein L4; n=66; Alphapr... 87 4e-16
UniRef50_UPI0001509D48 Cluster: ribosomal protein L4/L1 family p... 86 9e-16
UniRef50_Q8DMN0 Cluster: 50S ribosomal protein L4; n=16; Cyanoba... 86 9e-16
UniRef50_Q85FW2 Cluster: Chloroplast 50S ribosomal protein L4; n... 85 2e-15
UniRef50_Q9TLT3 Cluster: Chloroplast 50S ribosomal protein L4; n... 84 4e-15
UniRef50_A5IYY5 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 83 7e-15
UniRef50_A3EVS0 Cluster: Ribosomal protein L4; n=1; Leptospirill... 83 7e-15
UniRef50_P51313 Cluster: Chloroplast 50S ribosomal protein L4; n... 83 7e-15
UniRef50_Q8RIF6 Cluster: 50S ribosomal protein L4; n=3; Fusobact... 83 9e-15
UniRef50_A0L5X4 Cluster: Ribosomal protein L4/L1e; n=1; Magnetoc... 82 1e-14
UniRef50_Q9FA03 Cluster: 50S ribosomal protein L4; n=1; Brachysp... 82 1e-14
UniRef50_Q6B8V4 Cluster: Chloroplast 50S ribosomal protein L4; n... 81 3e-14
UniRef50_A4E9J5 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q5PA59 Cluster: 50S ribosomal protein L4; n=11; Alphapr... 80 6e-14
UniRef50_Q0EW37 Cluster: 50S ribosomal protein L4; n=1; Mariprof... 79 8e-14
UniRef50_P49546 Cluster: Chloroplast 50S ribosomal protein L4; n... 79 8e-14
UniRef50_Q6A6M7 Cluster: 50S ribosomal protein L4; n=1; Propioni... 79 1e-13
UniRef50_Q1ISC1 Cluster: Ribosomal protein L4/L1e; n=2; Acidobac... 78 2e-13
UniRef50_P61063 Cluster: 50S ribosomal protein L4; n=9; Desulfur... 78 2e-13
UniRef50_A3CHF3 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_Q9PQQ9 Cluster: 50S ribosomal protein L4; n=1; Ureaplas... 77 6e-13
UniRef50_Q601L4 Cluster: 50S ribosomal protein L4; n=5; Mycoplas... 77 6e-13
UniRef50_Q98PY2 Cluster: 50S ribosomal protein L4; n=1; Mycoplas... 76 8e-13
UniRef50_A7CUV4 Cluster: Ribosomal protein L4/L1e; n=1; Opitutac... 75 1e-12
UniRef50_Q5BZ19 Cluster: SJCHGC04542 protein; n=2; Schistosoma j... 75 1e-12
UniRef50_P49665 Cluster: 50S ribosomal protein L4; n=6; Bacteria... 75 2e-12
UniRef50_P75579 Cluster: 50S ribosomal protein L4; n=2; Mycoplas... 75 2e-12
UniRef50_O66432 Cluster: 50S ribosomal protein L4; n=2; Aquifex|... 75 2e-12
UniRef50_A6DPN5 Cluster: 50S ribosomal protein L4; n=1; Lentisph... 75 2e-12
UniRef50_O83220 Cluster: 50S ribosomal protein L4; n=5; Spirocha... 75 2e-12
UniRef50_Q9XD35 Cluster: 50S ribosomal protein L4; n=4; Leptospi... 75 2e-12
UniRef50_P56032 Cluster: 50S ribosomal protein L4; n=28; Epsilon... 74 4e-12
UniRef50_Q6UCS1 Cluster: Ribosomal protein L4; n=1; uncultured m... 73 7e-12
UniRef50_A5USI8 Cluster: Ribosomal protein L4/L1e; n=5; Chlorofl... 73 7e-12
UniRef50_A5KRQ2 Cluster: Ribosomal protein L4/L1e; n=1; candidat... 73 7e-12
UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Trophery... 73 7e-12
UniRef50_Q2S3R3 Cluster: 50S ribosomal protein L4; n=1; Saliniba... 73 7e-12
UniRef50_UPI00015BD7F8 Cluster: UPI00015BD7F8 related cluster; n... 73 9e-12
UniRef50_Q0TWI7 Cluster: Putative uncharacterized protein; n=6; ... 73 9e-12
UniRef50_A1CBM7 Cluster: 50S ribosomal protein L4; n=6; Eurotiom... 73 9e-12
UniRef50_A7BY81 Cluster: Ribosomal protein L4/L1e; n=2; Gammapro... 72 1e-11
UniRef50_Q84U22 Cluster: Ribosomal protein L4; n=1; Chlamydomona... 72 1e-11
UniRef50_O46895 Cluster: Chloroplast 50S ribosomal protein L4; n... 72 2e-11
UniRef50_Q5PIV3 Cluster: 50S ribosomal protein L4; n=72; Bacteri... 71 2e-11
UniRef50_Q2GED8 Cluster: 50S ribosomal protein L4; n=1; Neoricke... 71 2e-11
UniRef50_A6PR86 Cluster: Ribosomal protein L4/L1e; n=1; Victival... 71 3e-11
UniRef50_Q4A5C2 Cluster: 50S ribosomal protein L4; n=2; Mycoplas... 71 3e-11
UniRef50_Q8KAH3 Cluster: 50S ribosomal protein L4; n=10; Bactero... 70 5e-11
UniRef50_Q7XYP3 Cluster: Ribosomal protein rpL4; n=1; Bigelowiel... 69 9e-11
UniRef50_Q6ME62 Cluster: Putative 50S ribosomal protein L4; n=1;... 69 2e-10
UniRef50_Q7RXV7 Cluster: Putative uncharacterized protein NCU014... 69 2e-10
UniRef50_Q54RB5 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q5ZYP2 Cluster: 50S ribosomal protein L4; n=6; Gammapro... 68 2e-10
UniRef50_Q1VLV8 Cluster: 50S ribosomal protein L4; n=1; Psychrof... 67 3e-10
UniRef50_Q3ZZM3 Cluster: 50S ribosomal protein L4; n=3; Dehaloco... 67 3e-10
UniRef50_A4S817 Cluster: Plastid ribosomal protein L4 large ribo... 67 5e-10
UniRef50_Q5KM69 Cluster: Ribosomal protein L4, putative; n=2; Fi... 67 5e-10
UniRef50_Q8DE40 Cluster: 50S ribosomal protein L4; n=46; Gammapr... 66 6e-10
UniRef50_Q4FUF5 Cluster: 50S ribosomal protein L4; n=15; Proteob... 66 1e-09
UniRef50_Q8EUB4 Cluster: 50S ribosomal protein L4; n=3; Mycoplas... 66 1e-09
UniRef50_Q2IJ86 Cluster: 50S ribosomal protein L4; n=4; Cystobac... 64 3e-09
UniRef50_Q7VQE7 Cluster: 50S ribosomal protein L4; n=6; Gammapro... 64 4e-09
UniRef50_Q1AU30 Cluster: Ribosomal protein L4/L1e; n=1; Rubrobac... 62 1e-08
UniRef50_O50061 Cluster: 50S ribosomal protein L4, chloroplast p... 62 1e-08
UniRef50_Q62GK6 Cluster: 50S ribosomal protein L4; n=71; Proteob... 58 3e-07
UniRef50_Q5P331 Cluster: 50S ribosomal protein L4; n=26; Proteob... 56 7e-07
UniRef50_O74801 Cluster: Mitochondrial ribosomal protein subunit... 56 9e-07
UniRef50_Q7UN19 Cluster: 50S ribosomal protein L4; n=3; Planctom... 56 9e-07
UniRef50_Q8KTP1 Cluster: Ribosomal protein L4; n=1; Candidatus T... 55 2e-06
UniRef50_Q4FLL9 Cluster: 50S ribosomal protein L4; n=2; Candidat... 55 2e-06
UniRef50_Q00UM3 Cluster: Chromosome 16 contig 1, DNA sequence; n... 54 3e-06
UniRef50_Q5L719 Cluster: 50S ribosomal protein L4; n=8; Chlamydi... 54 3e-06
UniRef50_Q9AIG3 Cluster: Ribosomal protein L4; n=4; Candidatus C... 52 2e-05
UniRef50_Q7MTL4 Cluster: 50S ribosomal protein L4; n=29; cellula... 51 2e-05
UniRef50_P51998 Cluster: 54S ribosomal protein YmL6, mitochondri... 51 2e-05
UniRef50_Q1NYY2 Cluster: 50S ribosomal protein L4; n=1; Candidat... 50 4e-05
UniRef50_Q82X87 Cluster: 50S ribosomal protein L4; n=24; Proteob... 50 4e-05
UniRef50_Q7YN80 Cluster: Ribosomal protein L4; n=1; Eimeria tene... 50 6e-05
UniRef50_Q5AFP9 Cluster: Likely mitochondrial ribosomal protein;... 50 7e-05
UniRef50_A0CQM2 Cluster: Chromosome undetermined scaffold_24, wh... 44 0.004
UniRef50_Q4EE76 Cluster: Ribosomal protein L4/L1 family; n=1; Li... 43 0.006
UniRef50_A3LWF5 Cluster: Predicted protein; n=3; Saccharomycetac... 42 0.015
UniRef50_Q06RI4 Cluster: 23S ribosomal protein L4; n=1; Brucella... 39 0.11
UniRef50_Q25805 Cluster: Rpl4 protein; n=1; Plasmodium falciparu... 39 0.14
UniRef50_A7HD33 Cluster: Hemerythrin HHE cation binding domain p... 36 0.98
UniRef50_Q9MTE6 Cluster: Ribosomal protein L4; n=1; Toxoplasma g... 36 0.98
UniRef50_Q339M5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_Q4P7R0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A7DNT6 Cluster: Major facilitator superfamily MFS_1; n=... 35 2.3
UniRef50_Q6ATT8 Cluster: Putative uncharacterized protein OSJNBb... 34 4.0
UniRef50_Q6IKC3 Cluster: HDC12883; n=1; Drosophila melanogaster|... 34 4.0
UniRef50_A1GGH0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q8Q0G8 Cluster: Hypothetical sensory transduction histi... 33 5.2
UniRef50_Q0UK53 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_UPI000023E898 Cluster: hypothetical protein FG02472.1; ... 33 9.2
UniRef50_Q0J0Z3 Cluster: Os09g0475200 protein; n=2; Oryza sativa... 33 9.2
>UniRef50_Q9V3D0 Cluster: CG5818-PA; n=6; Endopterygota|Rep:
CG5818-PA - Drosophila melanogaster (Fruit fly)
Length = 296
Score = 231 bits (566), Expect = 1e-59
Identities = 106/177 (59%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
Frame = +1
Query: 181 SAAVTTTTANKTINILKKEWE--FPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAP 354
+A V A ++ IL +++ P R+ WIEN D+V E+K+GLIELHP V+AA
Sbjct: 34 AATVGAPPATRSPLILPQDYTDCLPVSRNTARQAWIENTDAVAERKVGLIELHPDVFAAQ 93
Query: 355 PRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 534
PR+DII NV WQ KYR+VS AHTKTRAEVRGGG+KPWPQKG GRARHGS+RSP+ +GGG
Sbjct: 94 PRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGG 153
Query: 535 VAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLI 705
V HGPRS +HF+MLPF+ R+ GLT+TLS KLAQDDLHI+ ++++PT ++++L DLI
Sbjct: 154 VVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHIIDNVDIPTGDAEFLKDLI 210
>UniRef50_Q9BYD3 Cluster: Mitochondrial 39S ribosomal protein L4;
n=25; Coelomata|Rep: Mitochondrial 39S ribosomal protein
L4 - Homo sapiens (Human)
Length = 311
Score = 207 bits (506), Expect = 2e-52
Identities = 92/161 (57%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
Frame = +1
Query: 223 ILKKEWEFP-PLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRK 399
+L+K E P P + +P + W+E+L E++++GL +LHP V+A PR+DI+H +WQ+
Sbjct: 47 VLRKV-ELPVPTHRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKN 105
Query: 400 YRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFML 579
++ +S+A TKTRAEVRGGG+KPWPQKG GRARHGSIRSPL+RGGGVAHGPR S+++ML
Sbjct: 106 FKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYML 165
Query: 580 PFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDL 702
P +R GL L+ KLAQDDLHI+ LELPT + QYL +L
Sbjct: 166 PMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTEL 206
>UniRef50_UPI0000E4A057 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L4 (L4mt); n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L4 (L4mt) - Strongylocentrotus
purpuratus
Length = 560
Score = 190 bits (464), Expect = 2e-47
Identities = 84/160 (52%), Positives = 115/160 (71%)
Frame = +1
Query: 223 ILKKEWEFPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKY 402
I ++ P +P + W+E ++S+E+ KLGL++LHP V+A PR+DI+H NV+WQR Y
Sbjct: 76 ITSRDLLHPDPTVEPIQAWLETINSLEDNKLGLLDLHPHVFATFPRLDILHRNVLWQRNY 135
Query: 403 RWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLP 582
+ +S A K+RAEVRGGGKKPW QKG GRARHGS RSP++ GGG A GPR +S++++LP
Sbjct: 136 KRISMAKAKSRAEVRGGGKKPWRQKGTGRARHGSTRSPIWIGGGKALGPRGPRSYWYVLP 195
Query: 583 FHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDL 702
+R HGL L+ K QDDLHIV L++P+ + YL DL
Sbjct: 196 EKIRAHGLRVALTVKYTQDDLHIVDSLDIPSADPGYLQDL 235
>UniRef50_O17005 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 299
Score = 166 bits (404), Expect = 4e-40
Identities = 78/175 (44%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Frame = +1
Query: 190 VTTTTANKTINILKKEWEFPPL-YTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRID 366
V++T++ ++I+ ++ W P + K + W+ NLD++E++KLGL++LHP ++ PRID
Sbjct: 22 VSSTSSGESIDTRRELWRKPENPFIKTPQAWVSNLDTIEDEKLGLVDLHPDIFRTSPRID 81
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
I+H N+ WQ YR V T+AE+ GGG+KPWPQK GRA GSIRSP F GG A+G
Sbjct: 82 ILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKPWPQKKTGRAHVGSIRSPQFIRGGFANG 141
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE-LPTDESQYLVDLIE 708
R ++ F+MLP +R+ GL L+ K QDDLHIV ++ L + +Y +DL E
Sbjct: 142 VRGPRTWFYMLPDAVRIQGLCVALTLKHTQDDLHIVDKIQNLQNGDPKYWIDLCE 196
>UniRef50_A7RJ96 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 299
Score = 144 bits (348), Expect = 3e-33
Identities = 69/136 (50%), Positives = 94/136 (69%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
++K LG+IEL+ V+ PRIDI+H V+WQR R A K R+EVRGGG+KPWPQKG
Sbjct: 93 DDKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQKG 152
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
L +AR GSIR+P FRGGGV HGP+ +S+ + LP +R GL LS +LAQ DLHIV+
Sbjct: 153 LNKARQGSIRAPHFRGGGVVHGPKP-RSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVES 211
Query: 661 LELPTDESQYLVDLIE 708
+ ++ Q L+ +++
Sbjct: 212 FD-DIEDDQDLMPILD 226
>UniRef50_P38516 Cluster: 50S ribosomal protein L4; n=6;
Bacteria|Rep: 50S ribosomal protein L4 - Thermotoga
maritima
Length = 235
Score = 108 bits (259), Expect = 2e-22
Identities = 56/142 (39%), Positives = 86/142 (60%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
+L +V+ +K+G +E+ V+ P D++ V Q R A TKTR EV GGG+KP
Sbjct: 5 DLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKP 64
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
WPQK GRARHGSIRSP++R GGV HGP+ + L ++ L + LS K ++ L
Sbjct: 65 WPQKHTGRARHGSIRSPIWRHGGVVHGPKP-RDWSKKLNKKMKKLALRSALSVKYRENKL 123
Query: 646 HIVKDLELPTDESQYLVDLIEN 711
++ DL+L +++ L ++++N
Sbjct: 124 LVLDDLKLERPKTKSLKEILQN 145
>UniRef50_Q8VY61 Cluster: 50S ribosomal protein L4; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 300
Score = 107 bits (258), Expect = 2e-22
Identities = 60/133 (45%), Positives = 80/133 (60%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
EEK G + L V+ P R DIIH+ V WQ R TKT +EV G G+KPW QKG
Sbjct: 99 EEK--GFMVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKG 156
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
GRARHG++R P FRGG V HGP+ +SH + +R GL L+A+ A+ L + D
Sbjct: 157 TGRARHGTLRGPQFRGGCVMHGPKP-RSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDD 215
Query: 661 LELPTDESQYLVD 699
L LPT +++ +V+
Sbjct: 216 LGLPTHKTKNIVN 228
>UniRef50_Q075M8 Cluster: Plastid 50S ribosomal protein L4 family;
n=1; Prototheca wickerhamii|Rep: Plastid 50S ribosomal
protein L4 family - Prototheca wickerhamii
Length = 228
Score = 103 bits (248), Expect = 3e-21
Identities = 61/131 (46%), Positives = 76/131 (58%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLG 486
+ +G L V+ R DI+H V WQ R TKTR EVRGGG+KP PQKG G
Sbjct: 79 RSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTEVRGGGRKPRPQKGGG 138
Query: 487 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
+R GSIR+P +RGGGVAHGP +SH L +R GL + LSAK + L IV L
Sbjct: 139 VSRQGSIRAPQWRGGGVAHGP-VPRSHAIKLLKSIRRLGLRSALSAKAREGRLVIVDTLR 197
Query: 667 LPTDESQYLVD 699
LP +++ L D
Sbjct: 198 LPEAKTRALAD 208
>UniRef50_Q67JU4 Cluster: 50S ribosomal protein L4; n=39;
Bacteria|Rep: 50S ribosomal protein L4 - Symbiobacterium
thermophilum
Length = 207
Score = 99.1 bits (236), Expect = 9e-20
Identities = 55/137 (40%), Positives = 76/137 (55%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
E +G I L V+ A ++H V + A TKTRAEV GGG+KPW QKG
Sbjct: 10 EGATVGEITLSDAVFGAEVNPGLLHEVVQMYLANKRQGTADTKTRAEVSGGGRKPWRQKG 69
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
GRARHGSIRSPL+R GG+ GP + + + +P R L LSAK+ +L +V
Sbjct: 70 TGRARHGSIRSPLWRKGGIVFGPHP-REYGWSMPKKARRAALRQALSAKVKSGELIVVDK 128
Query: 661 LELPTDESQYLVDLIEN 711
EL +++ + L++N
Sbjct: 129 FELEAPKTREVATLLKN 145
>UniRef50_Q8ETY1 Cluster: 50S ribosomal protein L4; n=79;
Firmicutes|Rep: 50S ribosomal protein L4 -
Oceanobacillus iheyensis
Length = 207
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/132 (36%), Positives = 81/132 (61%)
Frame = +1
Query: 313 LGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRA 492
+G IEL+ V+ P ++H V+ QR K R+EVRGGG+KPW QKG GRA
Sbjct: 14 VGDIELNDSVFGIEPNTHVLHEAVVMQRASLRQGTHAVKNRSEVRGGGRKPWRQKGTGRA 73
Query: 493 RHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELP 672
R GS RSP + GGG GP + +S+ + LP +R L + LS+K+ ++ L +++++ +
Sbjct: 74 RQGSTRSPQWVGGGTVFGP-TPRSYSYKLPKKVRRLALRSALSSKVNEESLLVLENISID 132
Query: 673 TDESQYLVDLIE 708
+++ +V++++
Sbjct: 133 APKTKEIVNILK 144
>UniRef50_Q30Z43 Cluster: 50S ribosomal protein L4; n=4;
Desulfovibrionaceae|Rep: 50S ribosomal protein L4 -
Desulfovibrio desulfuricans (strain G20)
Length = 206
Score = 96.7 bits (230), Expect = 5e-19
Identities = 51/132 (38%), Positives = 81/132 (61%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
++K+ G + L P V+ R +I++ V QR + KTR+ + GGG KPW QKG
Sbjct: 10 DKKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGGGAKPWRQKG 69
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
GRAR GS RSP++RGG V GP+ + + F + +R L LS++LA+++L +VK
Sbjct: 70 TGRARSGSNRSPVWRGGAVVFGPQP-RDYSFKVNKKVRKLALKMALSSRLAEENLMVVKG 128
Query: 661 LELPTDESQYLV 696
+ELP +++++V
Sbjct: 129 IELPEVKTKHMV 140
>UniRef50_Q9ZCQ6 Cluster: 50S ribosomal protein L4; n=10;
Rickettsieae|Rep: 50S ribosomal protein L4 - Rickettsia
prowazekii
Length = 207
Score = 95.1 bits (226), Expect = 2e-18
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAP-PRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWP 471
S+ +++G I L+ ++A R DII + WQR TKT +EV G KKP+
Sbjct: 7 SLANEEVGEITLNKDIFAVEFIRDDIIKQVIDWQRAKAMFGNHKTKTVSEVSGTTKKPFK 66
Query: 472 QKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHI 651
QKG G AR GS+RS RGGG++HGP+ +SH LP +R GL LS K A++ L I
Sbjct: 67 QKGTGNARQGSLRSVQMRGGGISHGPKV-RSHAIKLPKKVRKLGLIHALSEKYAEEKLLI 125
Query: 652 VKDLELPTDESQYLVDLI 705
+ L+L ++ LV+L+
Sbjct: 126 IDSLKLDKPKTSILVNLL 143
>UniRef50_Q2LQA0 Cluster: 50S ribosomal protein L4; n=3;
Deltaproteobacteria|Rep: 50S ribosomal protein L4 -
Syntrophus aciditrophicus (strain SB)
Length = 217
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/151 (33%), Positives = 85/151 (56%)
Frame = +1
Query: 256 YTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTR 435
Y++ ++ + + + + K+ IEL+ V+ A +I+ V Q R A TK R
Sbjct: 5 YSRVNKMLVAEVFDINKNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGR 64
Query: 436 AEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTT 615
++V GGGKKPW QKG GRAR G+ RSP++RGGG+ GP + + + +P +R + L +
Sbjct: 65 SDVSGGGKKPWRQKGTGRARSGTSRSPIWRGGGIVFGP-VPRDYKYNVPKKVRKNALRSV 123
Query: 616 LSAKLAQDDLHIVKDLELPTDESQYLVDLIE 708
LS K L ++KD L +++ ++++
Sbjct: 124 LSLKYQGQKLVVLKDFPLDEIKTKKFKEVVD 154
>UniRef50_Q6F1Z3 Cluster: 50S ribosomal protein L4; n=6;
Firmicutes|Rep: 50S ribosomal protein L4 - Mesoplasma
florum (Acholeplasma florum)
Length = 208
Score = 94.3 bits (224), Expect = 3e-18
Identities = 51/139 (36%), Positives = 78/139 (56%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQ 474
+V+ +++ I L+ V+ P I+ VI Q+ TKTRAEVRGGGKKPW Q
Sbjct: 7 NVQGQEVKTISLNDSVWNVAPHKQAIYDTVISQQAALRQGTKKTKTRAEVRGGGKKPWRQ 66
Query: 475 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
KG GRAR GSIR+P +RGGGV GP ++ + +R + LS K ++ +L IV
Sbjct: 67 KGTGRARQGSIRAPHWRGGGVTFGPTPDINYKKSVNKKVRALAFKSALSIKASEQNLVIV 126
Query: 655 KDLELPTDESQYLVDLIEN 711
+ ++ ++ +++N
Sbjct: 127 DKFDFAKPSTKEMISVMKN 145
>UniRef50_Q1Q137 Cluster: Strongly similar to 50S ribosomal protein
L4; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L4 -
Candidatus Kuenenia stuttgartiensis
Length = 203
Score = 93.9 bits (223), Expect = 4e-18
Identities = 47/137 (34%), Positives = 82/137 (59%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
E KK+ +++ + +P R ++ V + TKTRAEV GGGKKPW QK
Sbjct: 9 EGKKIENMQVPDSISDSPVRYKLLRDVVKMYEANKRQGTVSTKTRAEVSGGGKKPWAQKH 68
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
G+AR GS RSP++RGGGVA GP+ + + + +P + L + LS+K+ +++ +V
Sbjct: 69 TGKARAGSSRSPIWRGGGVAFGPKP-RDYSYSIPKMAKKQALFSALSSKIKDNEVVVVDK 127
Query: 661 LELPTDESQYLVDLIEN 711
L+ + +++++V L+++
Sbjct: 128 LDFASPKTKHMVSLLKS 144
>UniRef50_Q00YX6 Cluster: 50S ribosomal protein L4; n=2;
Ostreococcus|Rep: 50S ribosomal protein L4 -
Ostreococcus tauri
Length = 275
Score = 92.3 bits (219), Expect = 1e-17
Identities = 49/105 (46%), Positives = 62/105 (59%)
Frame = +1
Query: 340 VYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPL 519
++ P R+D+ H V WQR TKTR EV G +K PQKG GRAR G +R+P
Sbjct: 62 IFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRARVGMLRAPQ 121
Query: 520 FRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
RGGGVAHGP +SH + LP +R GL LSA+ A+ + IV
Sbjct: 122 MRGGGVAHGP-VPRSHAYALPKKVRRMGLKVALSARAAEGKIVIV 165
>UniRef50_P61054 Cluster: 50S ribosomal protein L4; n=25;
Firmicutes|Rep: 50S ribosomal protein L4 - Listeria
innocua
Length = 207
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/132 (36%), Positives = 76/132 (57%)
Frame = +1
Query: 316 GLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRAR 495
G I L+ V+ P ++ ++ QR K R+EVRGGG+KPW QKG GRAR
Sbjct: 15 GEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRAR 74
Query: 496 HGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPT 675
GSIRSP +RGGGV GP + +S+ + LP +R + + LS+K+ ++ L +++ L
Sbjct: 75 QGSIRSPQWRGGGVVFGP-TPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDA 133
Query: 676 DESQYLVDLIEN 711
+++ ++N
Sbjct: 134 PKTKEFAAFLKN 145
>UniRef50_Q6AP70 Cluster: 50S ribosomal protein L4; n=2;
Desulfobacterales|Rep: 50S ribosomal protein L4 -
Desulfotalea psychrophila
Length = 211
Score = 91.1 bits (216), Expect = 2e-17
Identities = 49/120 (40%), Positives = 70/120 (58%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQ 474
+ +K+ IEL+ ++ + I+H V QR + A TKTR EVRGGG KPW Q
Sbjct: 12 NTNNEKVDEIELNDAIFNREVKEYILHDVVRMQRAAKRAGTASTKTRVEVRGGGAKPWRQ 71
Query: 475 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
KG GRAR GS SPL+RGGGV GP+ + + F L +R ++ LSA+ + +L ++
Sbjct: 72 KGTGRARAGSRTSPLWRGGGVTFGPKP-RDYSFKLNRKVRQQAVSMALSARFQEGNLIVL 130
>UniRef50_UPI0000057DE0 Cluster: 50S ribosomal protein L4; n=1;
Brucella melitensis 16M|Rep: 50S ribosomal protein L4 -
Brucella melitensis 16M
Length = 201
Score = 89.8 bits (213), Expect = 6e-17
Identities = 53/136 (38%), Positives = 73/136 (53%)
Frame = +1
Query: 289 LDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPW 468
+ ++E K G ++L+ ++ PR DI+ V WQ R + R +V G K +
Sbjct: 5 ITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQGRGDVSRTGSKMY 64
Query: 469 PQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLH 648
QKG GRARH S R+P FRGGG AHGP ++H LP +R GL LSAK DL
Sbjct: 65 KQKGTGRARHHSARAPQFRGGGQAHGP-VVRNHDHDLPKKVRALGLRHALSAKAKASDLI 123
Query: 649 IVKDLELPTDESQYLV 696
I+ DL +++ LV
Sbjct: 124 IIDDLASADAKTKQLV 139
>UniRef50_P61061 Cluster: 50S ribosomal protein L4; n=1;
Bdellovibrio bacteriovorus|Rep: 50S ribosomal protein L4
- Bdellovibrio bacteriovorus
Length = 209
Score = 89.4 bits (212), Expect = 8e-17
Identities = 51/126 (40%), Positives = 74/126 (58%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
N+ + +++K+G +EL V+ P + +++H+ V WQ R TKT+ V GGGKKP
Sbjct: 5 NVLNWKKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKKP 64
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
+ QKG G AR GS RS L GGG A GP+ +S+ F+LP +R GL+ LS + L
Sbjct: 65 FKQKGTGGARQGSSRSILMPGGGTAFGPQP-RSYAFVLPKKVRRLGLSMALSHLQKEGKL 123
Query: 646 HIVKDL 663
IV +
Sbjct: 124 FIVDSM 129
>UniRef50_Q28UW1 Cluster: 50S ribosomal protein L4; n=28;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Jannaschia sp. (strain CCS1)
Length = 206
Score = 88.6 bits (210), Expect = 1e-16
Identities = 50/137 (36%), Positives = 73/137 (53%)
Frame = +1
Query: 298 VEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQK 477
++ KK G ++L ++ PR DI+H V WQR KTR EV KK + QK
Sbjct: 8 LDGKKAGSVDLDEALFGLEPRADILHRVVRWQRNNAQAGTHKVKTRREVSYSTKKIYRQK 67
Query: 478 GLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVK 657
G G ARHG+ +P+FRGGGV GP + +SH L R GL LSAK A+ L +++
Sbjct: 68 GTGGARHGARSAPIFRGGGVYKGP-TPRSHGHELTKKFRKLGLRHALSAKAAEGRLVVIE 126
Query: 658 DLELPTDESQYLVDLIE 708
+ + ++ L ++
Sbjct: 127 SIAMDEAKTSALAKQVK 143
>UniRef50_Q4PHH8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 438
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/114 (42%), Positives = 70/114 (61%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
+ L V+ AP R D+IHS V++ + A TK R++VRG +K PQKG G+AR G
Sbjct: 147 VPLSAHVFDAPARRDVIHSAVVYYLDAQRSGTASTKGRSDVRGSMRKLRPQKGSGQARLG 206
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL 663
++ +P+ RGG VAHGPR + H LP +R L + LS+K Q +L +V++L
Sbjct: 207 TMSNPILRGGAVAHGPRP-RDHSTKLPRRVRELALRSALSSKWRQGNLLVVENL 259
>UniRef50_Q6KI54 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L4 - Mycoplasma mobile
Length = 293
Score = 87.8 bits (208), Expect = 2e-16
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = +1
Query: 370 IHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
I +++++R + TKTR+EV GGGKKPW QKG GRAR GS RSP++ GGG+ GP
Sbjct: 119 IFDSILFERASQRQGTHSTKTRSEVSGGGKKPWKQKGTGRARAGSTRSPIWVGGGITFGP 178
Query: 550 RSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ K + F + +R ++L+ LA + +V+DL+L SQ L+ +E+
Sbjct: 179 KPQKKYDFKINKKVRNLAFLSSLTL-LANKNAILVEDLKLEKISSQELIKKLED 231
>UniRef50_Q2JV82 Cluster: 50S ribosomal protein L4; n=20;
Cyanobacteria|Rep: 50S ribosomal protein L4 -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 326
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
AHTKTRAEVRGGG+KPW QKG GRAR GSIRSPL+R GGV GPR + + M +L
Sbjct: 49 AHTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLWRKGGVIFGPRKREYNLAMNRKERQL 108
Query: 598 HGLTTTLSAKLAQDDLHIVKDLE 666
L T L +++ +DL +V+D +
Sbjct: 109 -ALRTALQSRV--EDLIVVEDFQ 128
>UniRef50_Q2JFH5 Cluster: 50S ribosomal protein L4; n=49;
Actinobacteria (class)|Rep: 50S ribosomal protein L4 -
Frankia sp. (strain CcI3)
Length = 245
Score = 87.4 bits (207), Expect = 3e-16
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Frame = +1
Query: 316 GLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRAR 495
G +EL V+ P I +IH V+ Q TKTR EVRGGG+KP+ QKG GRAR
Sbjct: 27 GSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRAR 86
Query: 496 HGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL---E 666
GS+R+P F GGG HGP + + + P ++ L LS + + +H+V L E
Sbjct: 87 QGSLRAPQFTGGGTVHGP-TPRRYDQRTPKKMKAAALRGALSDRARNNRVHVVSSLVSGE 145
Query: 667 LPTDES 684
P+ +S
Sbjct: 146 TPSTKS 151
>UniRef50_A6GCH8 Cluster: 50S ribosomal protein L4; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L4 - Plesiocystis pacifica SIR-1
Length = 218
Score = 87.0 bits (206), Expect = 4e-16
Identities = 48/136 (35%), Positives = 75/136 (55%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
N+ +E + IE+ V+AA + ++ V WQR + A TK R+EV G K
Sbjct: 5 NVKDLEGNDVAEIEVSDEVFAAEVKEHLLWEVVRWQRAKKRAGTAKTKERSEVHGTRSKM 64
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
+ QKG G ARHGS R +FRGGG HGPR + + F + R L + LS + ++ +L
Sbjct: 65 YRQKGTGNARHGSRRVNVFRGGGQVHGPRP-RDYTFSVNKKARAGALRSALSLRASEGNL 123
Query: 646 HIVKDLELPTDESQYL 693
+++D E+P +++ L
Sbjct: 124 VVIRDFEVPDAKTRNL 139
>UniRef50_Q89J85 Cluster: 50S ribosomal protein L4; n=66;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Bradyrhizobium japonicum
Length = 206
Score = 87.0 bits (206), Expect = 4e-16
Identities = 53/134 (39%), Positives = 70/134 (52%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQ 474
++E K+ G ++L ++ PR DII V WQ R K RAE+ GKK + Q
Sbjct: 7 TLEGKEAGSVQLSDAIFGLEPRQDIIARCVQWQLNKRQAGTHKAKGRAEIWRTGKKMYKQ 66
Query: 475 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
KG G ARHGS R P FRGGG A GP +SH LP +R L LSAK DL ++
Sbjct: 67 KGTGGARHGSARVPQFRGGGRAFGP-VVRSHATDLPKKVRALALKHALSAKAKDGDLLVI 125
Query: 655 KDLELPTDESQYLV 696
L +++ L+
Sbjct: 126 DKAALEAAKTKALL 139
>UniRef50_UPI0001509D48 Cluster: ribosomal protein L4/L1 family
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein L4/L1 family protein - Tetrahymena
thermophila SB210
Length = 358
Score = 85.8 bits (203), Expect = 9e-16
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Frame = +1
Query: 211 KTINILKKEWEFPPLYTKPREVWIENLDSVEEKKLGL----IELHPMVYAAPPRIDIIHS 378
K IL K+W + K + + + L + E ++L ++ P R DI+HS
Sbjct: 50 KPDEILVKQWWSQSPFEKTQPLRVPVLKFLAENGQAYTGKTVDLDHDIFNVPLRRDIVHS 109
Query: 379 NVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSG 558
V+W++ + TKT+ V G GKKP+ QKG G+AR G+ R+P + GG AHG +
Sbjct: 110 YVLWRQNRDEIKTHITKTKGTVSGSGKKPYAQKGTGKARMGNKRAPGRKKGGKAHGAKP- 168
Query: 559 KSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIE 708
+ + L +RL L LSAKLA+ L I++ ++ +++ + ++E
Sbjct: 169 RILRYPLNKKIRLQALKVVLSAKLAEGKLRIIETEQVDEPKTRAIAKMLE 218
>UniRef50_Q8DMN0 Cluster: 50S ribosomal protein L4; n=16;
Cyanobacteria|Rep: 50S ribosomal protein L4 -
Synechococcus elongatus (Thermosynechococcus elongatus)
Length = 210
Score = 85.8 bits (203), Expect = 9e-16
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
I+H ++ Q TKTRAEVRGGG+KPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 32 IVHRALVRQLANARQGTVSTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 91
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL--ELPTDESQYLVDLIE 708
P+ M RL L T L +++ +DL +V+D LP +++ LV ++
Sbjct: 92 PKPRDYSQKMNRKERRL-ALRTALMSRV--EDLIVVQDFADHLPRPKTKELVTALQ 144
>UniRef50_Q85FW2 Cluster: Chloroplast 50S ribosomal protein L4; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 50S ribosomal
protein L4 - Cyanidioschyzon merolae (Red alga)
Length = 200
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 552
AHTKTRAE+RGGG+KPW QKG GRAR GS RSPL+RGGGVA GPR
Sbjct: 40 AHTKTRAEIRGGGRKPWKQKGTGRARAGSRRSPLWRGGGVAFGPR 84
>UniRef50_Q9TLT3 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Cyanidium caldarium|Rep: Chloroplast 50S ribosomal
protein L4 - Cyanidium caldarium
Length = 219
Score = 83.8 bits (198), Expect = 4e-15
Identities = 48/100 (48%), Positives = 59/100 (59%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++H Q K A TKT+++VRGGGKKPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 40 VVHRVFSIQNKLSREHTASTKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFG 99
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
P+ F + +RL L T LS L + +V LE
Sbjct: 100 PKPKNVFFKINKKEIRL-ALYTVLSNALPKTT--VVSSLE 136
>UniRef50_A5IYY5 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
agalactiae|Rep: 50S ribosomal protein L4 - Mycoplasma
agalactiae
Length = 300
Score = 83.0 bits (196), Expect = 7e-15
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Frame = +1
Query: 193 TTTTANKTINILKKEWEFPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRID-I 369
+T+T K K E KP V E + + + +L+P ++A+
Sbjct: 67 STSTTTKKATSAKAASEAKETVKKPA-VSAEKFEKSAKLEFDTSKLNPKLFASDKIYSQA 125
Query: 370 IHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
I +I R R K+RAEVRGGGKKPW QKG GRAR GS RSP++ GGG A GP
Sbjct: 126 IFDTIISDRASRRQGTHDVKSRAEVRGGGKKPWRQKGTGRARAGSTRSPIWVGGGRAFGP 185
Query: 550 RSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLEL 669
+++ + +R + + L+ LAQ +V D +L
Sbjct: 186 TPVRNYKLKVNKKVRFNAFVSVLTL-LAQSKAVVVDDFKL 224
>UniRef50_A3EVS0 Cluster: Ribosomal protein L4; n=1; Leptospirillum
sp. Group II UBA|Rep: Ribosomal protein L4 -
Leptospirillum sp. Group II UBA
Length = 218
Score = 83.0 bits (196), Expect = 7e-15
Identities = 43/114 (37%), Positives = 66/114 (57%)
Frame = +1
Query: 361 IDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVA 540
I ++H + QR A TKTR EV GGGKKP+ QKG GRAR GS R+P +RGG +
Sbjct: 30 IPLLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQWRGGAII 89
Query: 541 HGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDL 702
GPR + +F+ P + + + + L L++V L++P+ +++ L+ L
Sbjct: 90 FGPRP-RDYFYRQPAKKVVLAVKNAIFSHLENKSLYVVDSLDVPSRKTKDLIAL 142
>UniRef50_P51313 Cluster: Chloroplast 50S ribosomal protein L4; n=3;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L4 -
Porphyra purpurea
Length = 214
Score = 83.0 bits (196), Expect = 7e-15
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++H ++ Q + A+TKTR+EVRGGG+KPW QKG GRAR GSIRSPL+RGGGV G
Sbjct: 36 LVHRALVKQSNEKRQGSANTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 95
Query: 547 PR 552
P+
Sbjct: 96 PK 97
>UniRef50_Q8RIF6 Cluster: 50S ribosomal protein L4; n=3;
Fusobacterium nucleatum|Rep: 50S ribosomal protein L4 -
Fusobacterium nucleatum subsp. nucleatum
Length = 209
Score = 82.6 bits (195), Expect = 9e-15
Identities = 47/140 (33%), Positives = 81/140 (57%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
N+ ++ ++ G +E++ V+ P ++H + + A TKTRA VRGGG+KP
Sbjct: 5 NIYNLAGEQTGTVEVNDAVFGIEPNKVVLHEVLTAELAAARQGTASTKTRAMVRGGGRKP 64
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
+ QKG GRAR G+IR+P GGGV GP +S+ + +R L + LSAK+A ++
Sbjct: 65 FKQKGTGRARQGTIRAPHMVGGGVTFGPHP-RSYEKKVNKKVRNLALRSALSAKVAAGNV 123
Query: 646 HIVKDLELPTDESQYLVDLI 705
++ + T +++ +V+L+
Sbjct: 124 LVLDYDGIETPKTKVIVNLV 143
>UniRef50_A0L5X4 Cluster: Ribosomal protein L4/L1e; n=1;
Magnetococcus sp. MC-1|Rep: Ribosomal protein L4/L1e -
Magnetococcus sp. (strain MC-1)
Length = 207
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/127 (36%), Positives = 73/127 (57%)
Frame = +1
Query: 325 ELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGS 504
EL+ V+ R D++ V +Q R + A R++VRGGGKKP+ QKG G AR G+
Sbjct: 18 ELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGGKKPYRQKGTGNARQGT 77
Query: 505 IRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDES 684
IR+P FR GG+ GP+ + + L +R L T LS K + +++ +V LEL + ++
Sbjct: 78 IRAPQFRTGGIVFGPQQ-RDYSHKLNKKVRKLALQTALSVKASSEEMVVVDKLELASIKT 136
Query: 685 QYLVDLI 705
+ + L+
Sbjct: 137 KEMKALL 143
>UniRef50_Q9FA03 Cluster: 50S ribosomal protein L4; n=1; Brachyspira
pilosicoli|Rep: 50S ribosomal protein L4 - Brachyspira
pilosicoli
Length = 215
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 603
TKTRAEV GGGKKPW QKG GRAR GS RSP++ GGG H P+ + + + LP ++
Sbjct: 50 TKTRAEVSGGGKKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKP-RDYSYRLPKKMKRKA 108
Query: 604 LTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLI 705
L + LS K + L + +D +++ + I
Sbjct: 109 LLSVLSLKYGNNVLKVFEDFTFDAPKTKRMASFI 142
>UniRef50_Q6B8V4 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Gracilaria tenuistipitata var. liui|Rep: Chloroplast 50S
ribosomal protein L4 - Gracilaria tenuistipitata var.
liui (Red alga)
Length = 217
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/68 (58%), Positives = 46/68 (67%)
Frame = +1
Query: 358 RIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 537
+I I+H +I Q AHT+TR EV GGG+KPW QKG GRAR GS RSPL+RGGGV
Sbjct: 36 KIYILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGV 95
Query: 538 AHGPRSGK 561
GPR K
Sbjct: 96 IFGPRHKK 103
>UniRef50_A4E9J5 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 208
Score = 80.6 bits (190), Expect = 3e-14
Identities = 50/120 (41%), Positives = 63/120 (52%)
Frame = +1
Query: 301 EEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
E KK+ EL VY P I ++H V Q K R+EV GGGKKPW QKG
Sbjct: 10 EGKKVAEAELAAEVYGIEPNIHVMHHIVKCQMASWRQGTQSAKGRSEVSGGGKKPWRQKG 69
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
GRAR GSIR+ +R GGV P+ M ++L + + LSAKLA +L +V D
Sbjct: 70 TGRARQGSIRAAQWRHGGVVFAPKPRSYAKRMNNKEVKL-AMRSALSAKLADGELVLVDD 128
>UniRef50_Q5PA59 Cluster: 50S ribosomal protein L4; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L4 -
Anaplasma marginale (strain St. Maries)
Length = 208
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/125 (35%), Positives = 67/125 (53%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
N+ +++ + +G ++L V+ R D++ V WQ R T+ ++V G KP
Sbjct: 4 NVVNIKNEVVGKVQLSAEVFGVQLRRDVLRDVVTWQLAKRRAGTHKTRCISDVSGTTAKP 63
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
+ QK GRAR GS+RSP FRGG V GP +SH + L +R GL LS K++ L
Sbjct: 64 YRQKHTGRARQGSLRSPQFRGGAVVFGP-VNRSHAYSLNKKVRRLGLKVALSMKVSDSKL 122
Query: 646 HIVKD 660
++ D
Sbjct: 123 VVLDD 127
>UniRef50_Q0EW37 Cluster: 50S ribosomal protein L4; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L4 - Mariprofundus ferrooxydans PV-1
Length = 207
Score = 79.4 bits (187), Expect = 8e-14
Identities = 48/133 (36%), Positives = 65/133 (48%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLG 486
K++G EL+P V+ +H + + K R+EV GGGKKPW QKG G
Sbjct: 12 KEVGKRELNPAVFGLDADAAFVHRVYAALASAQRGGTSKVKDRSEVSGGGKKPWKQKGTG 71
Query: 487 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
RAR GS R +R GG AHGP + S + R L LS L + L +V LE
Sbjct: 72 RARAGSSRQAQWRHGGTAHGPSADTSFATRINKKERRRALCLALSDCLREGKLTVVDKLE 131
Query: 667 LPTDESQYLVDLI 705
L +++ VD +
Sbjct: 132 LAEIKTKAFVDTL 144
>UniRef50_P49546 Cluster: Chloroplast 50S ribosomal protein L4; n=3;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L4 - Odontella sinensis (Marine centric diatom)
Length = 215
Score = 79.4 bits (187), Expect = 8e-14
Identities = 45/104 (43%), Positives = 62/104 (59%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
+IH +++ + + TKTR+EVRGGG+KPW QKG GRAR GS RSPL++GGGV G
Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTD 678
P+ K L R L T L K ++++ I+ +LE D
Sbjct: 97 PKPRKI-ILKLNKKERKLALQTLLYNK--RNNISIIDNLETNLD 137
>UniRef50_Q6A6M7 Cluster: 50S ribosomal protein L4; n=1;
Propionibacterium acnes|Rep: 50S ribosomal protein L4 -
Propionibacterium acnes
Length = 301
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/91 (47%), Positives = 53/91 (58%)
Frame = +1
Query: 280 IENLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGK 459
I+ LD V+ KK G EL ++ I +IH V+ Q TKTR +V GGGK
Sbjct: 7 IDVLD-VKGKKAGSAELPGDLFDVNTNIPLIHQVVVAQLAAARQGTHATKTRGQVSGGGK 65
Query: 460 KPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 552
KPW QKG GRAR GS R+P + GGG HGP+
Sbjct: 66 KPWRQKGTGRARQGSTRAPQWVGGGTVHGPQ 96
>UniRef50_Q1ISC1 Cluster: Ribosomal protein L4/L1e; n=2;
Acidobacteria|Rep: Ribosomal protein L4/L1e -
Acidobacteria bacterium (strain Ellin345)
Length = 217
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAH-----TKTRAEVRGGGKKPWP 471
+K+G EL V+ A ++ +++W+ + + H TK + V G GKK W
Sbjct: 12 EKVGSFELADEVFGA------VNEDLLWEAVKHYRAGQHRGTHATKNKKLVSGAGKKLWK 65
Query: 472 QKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHI 651
QKG GRAR GSIRSPL+R GG HGP+ +S+ + P L L + L+AKLA L +
Sbjct: 66 QKGTGRARVGSIRSPLWRHGGTVHGPQP-RSYDYAFPRKKLLGALRSALAAKLADGKLTV 124
Query: 652 VKDLEL 669
V+ ++
Sbjct: 125 VESFDV 130
>UniRef50_P61063 Cluster: 50S ribosomal protein L4; n=9;
Desulfuromonadales|Rep: 50S ribosomal protein L4 -
Geobacter sulfurreducens
Length = 207
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/137 (32%), Positives = 73/137 (53%)
Frame = +1
Query: 298 VEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQK 477
+ + K+G+++L+ V+ + +IH + Q R K RA V GGGKKP+ QK
Sbjct: 9 ISKNKVGVMDLNDNVFNGEVKEYLIHEAIKVQLANRRAGTVSVKNRAIVSGGGKKPYRQK 68
Query: 478 GLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVK 657
G G+AR G IR+P F GGGVA GPR K + + R + + LS ++ L ++
Sbjct: 69 GTGQARQGCIRAPHFVGGGVAFGPRP-KVYNLSMNKKARKAAVRSALSMLYKENKLSVLD 127
Query: 658 DLELPTDESQYLVDLIE 708
LP+ ++ V +++
Sbjct: 128 SFTLPSISTKGFVTVLK 144
>UniRef50_A3CHF3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 323
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 460 KPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQD 639
KP+ QKG GRARHG++R P FRGG HGP+ +SH L +R GL LSA+ A+
Sbjct: 173 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKP-RSHAIKLQKKVRRLGLKIALSARTAEG 231
Query: 640 DLHIVKDLELPTDESQYLVDLI 705
L + +DLE+P+ +++ +V I
Sbjct: 232 KLLVFEDLEVPSHKTKNVVSYI 253
>UniRef50_Q9PQQ9 Cluster: 50S ribosomal protein L4; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L4 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 211
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 603
T T+ EVRGGGKKPW QK G+AR GS R+P + GGGV GP+ +++ + +RL
Sbjct: 51 TLTKGEVRGGGKKPWRQKHTGKARTGSTRNPHWTGGGVVFGPKPNRNYNLKVNAKVRLLA 110
Query: 604 LTTTLSAKLAQDD-LHIVKDLELPTDESQYLVDLIEN 711
+ L+ KL + L +V + +L T ++ +V+ I N
Sbjct: 111 FKSALTIKLNEGKMLGLVANSDLETPSTKKMVNFINN 147
>UniRef50_Q601L4 Cluster: 50S ribosomal protein L4; n=5;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
hyopneumoniae (strain 232)
Length = 214
Score = 76.6 bits (180), Expect = 6e-13
Identities = 42/118 (35%), Positives = 66/118 (55%)
Frame = +1
Query: 355 PRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG 534
P I +++ +R + +S K RAEV G GKKPW QK G+AR GS RSP+F GGG
Sbjct: 36 PHFQAIFDSILSERASKRLSTHKVKNRAEVSGTGKKPWKQKSTGKARAGSKRSPIFVGGG 95
Query: 535 VAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIE 708
A GP + +++ + ++ + LS +LAQ+ +V D + ++ LVD ++
Sbjct: 96 RAFGPTTQRNYNLKVNKKVKKLAFISALS-QLAQNQQILVNDFSMNKISTKLLVDQLK 152
>UniRef50_Q98PY2 Cluster: 50S ribosomal protein L4; n=1; Mycoplasma
pulmonis|Rep: 50S ribosomal protein L4 - Mycoplasma
pulmonis
Length = 292
Score = 76.2 bits (179), Expect = 8e-13
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = +1
Query: 325 ELHPMVYAAPPRID-IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
EL+ ++ D I ++ +R R K RAEV G GKKPW QKG G+AR G
Sbjct: 102 ELNSKIFEFEKNYDQAIFDCILSERASRRQGTHKVKNRAEVSGTGKKPWKQKGTGKARAG 161
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDE 681
S+R+P+F GGG A GP +++ + +RL+ L +L A LA+ + ++K L
Sbjct: 162 SLRNPIFVGGGRAFGPSVNRNYKISINKKVRLNALMASLFA-LAKSNSVLLKTFSLEKPS 220
Query: 682 SQYLVD 699
++ LV+
Sbjct: 221 TKDLVE 226
>UniRef50_A7CUV4 Cluster: Ribosomal protein L4/L1e; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L4/L1e -
Opitutaceae bacterium TAV2
Length = 214
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 552
TKTR EVRGGGKKPW QKG GRAR GS RSPL+ GGGV GPR
Sbjct: 54 TKTRGEVRGGGKKPWRQKGTGRARAGSTRSPLWVGGGVVFGPR 96
>UniRef50_Q5BZ19 Cluster: SJCHGC04542 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC04542 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Frame = +1
Query: 247 PPLYTKP----REVWIENL-------DSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQ 393
PP+Y P R W+E L S + +G+++LHP ++A PRID++H N+ WQ
Sbjct: 63 PPVYCSPTRNSRLAWLETLKPLGLSQSSNTQSLVGMVDLHPDIFAVFPRIDLVHKNLYWQ 122
Query: 394 RKYRWVSWAHTKTRAEV-RGGGKKPWPQKGL 483
YR + W TRAE+ G KKPWPQK L
Sbjct: 123 AHYRLIDWRCITTRAELPYGTRKKPWPQKKL 153
>UniRef50_P49665 Cluster: 50S ribosomal protein L4; n=6;
Bacteria|Rep: 50S ribosomal protein L4 - Thermus
thermophilus
Length = 210
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/92 (42%), Positives = 53/92 (57%)
Frame = +1
Query: 382 VIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGK 561
V WQ R A TKTR EV G+K WPQK GRARHG I +P+F GGGV GP+ +
Sbjct: 37 VRWQLAKRRRGTASTKTRGEVAYSGRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKP-R 95
Query: 562 SHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVK 657
+ + LP +R GL ++ + + L +V+
Sbjct: 96 DYSYTLPKKVRKKGLAMAVADRAREGKLLLVE 127
>UniRef50_P75579 Cluster: 50S ribosomal protein L4; n=2;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
pneumoniae
Length = 212
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 406 WVSWAHT-KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLP 582
W H+ T+ EVRGGGKKP+ QK G+AR GS R+P F GGG+ GP+ +++ L
Sbjct: 45 WRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGSTRNPHFVGGGIVFGPKPNRNYSLKLN 104
Query: 583 FHLRLHGLTTTLSAKLAQDDLHIV 654
L T S KLA D+ H+V
Sbjct: 105 KKAHTAALHTVWSEKLASDNTHLV 128
>UniRef50_O66432 Cluster: 50S ribosomal protein L4; n=2;
Aquifex|Rep: 50S ribosomal protein L4 - Aquifex aeolicus
Length = 199
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/120 (36%), Positives = 63/120 (52%)
Frame = +1
Query: 310 KLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGR 489
K+G +E+ V+ + ++ V WQ R TKTR EV G+K PQKG G
Sbjct: 2 KIGDVEVRDDVFNVKVKKHVLWEVVKWQLAKRRQGTHSTKTRGEVAYSGRKILPQKGTGN 61
Query: 490 ARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLEL 669
ARHG +F GGGVAHGP+ + + + LP +R GL LS K + + V +++L
Sbjct: 62 ARHGERGVNIFVGGGVAHGPKP-RDYEYPLPKRVRKLGLKMALSDKARNNAIIFVDNIDL 120
>UniRef50_A6DPN5 Cluster: 50S ribosomal protein L4; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L4 - Lentisphaera araneosa HTCC2155
Length = 215
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/98 (37%), Positives = 59/98 (60%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
A+TKTR+E RGGG+KPW QKG G AR GS RSP++ GGGVA GP+ +S+ + +R
Sbjct: 49 ANTKTRSEKRGGGRKPWRQKGTGNARAGSTRSPIWTGGGVAFGPKP-RSYAKNVNKKVRR 107
Query: 598 HGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ L+ ++ ++L +V ++ + +E+
Sbjct: 108 LAVRRALAERIQAEELIVVDSFAFEKPSTKTAIAFLES 145
>UniRef50_O83220 Cluster: 50S ribosomal protein L4; n=5;
Spirochaetaceae|Rep: 50S ribosomal protein L4 -
Treponema pallidum
Length = 216
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/139 (30%), Positives = 72/139 (51%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQ 474
SVE L +EL V+ +I+ + + + + A TK R+EV G KP+ Q
Sbjct: 7 SVEGVALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQ 66
Query: 475 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
KG GRAR G +SPL GGG GP+ H + LP ++ + + LS K D L ++
Sbjct: 67 KGTGRARRGDKKSPLLVGGGTIFGPKPRDFH-YALPKKVKRLAMKSLLSLKAQGDALTVI 125
Query: 655 KDLELPTDESQYLVDLIEN 711
+D + + +++ L+ ++ +
Sbjct: 126 EDFTVESGKTRDLIQVLRH 144
>UniRef50_Q9XD35 Cluster: 50S ribosomal protein L4; n=4;
Leptospira|Rep: 50S ribosomal protein L4 - Leptospira
interrogans
Length = 211
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 603
TKTR+ V GGGKKPW QKG GRAR GS R+P + GGG HGP+ + + + + L+
Sbjct: 50 TKTRSMVSGGGKKPWSQKGTGRARQGSTRAPHWVGGGTVHGPQK-RDYSYKVSSKLKHRA 108
Query: 604 LTTTLSAKLAQDDLHIVKDLE 666
+ + L K + +V+DL+
Sbjct: 109 VLSILGKKAQASAVKVVEDLD 129
>UniRef50_P56032 Cluster: 50S ribosomal protein L4; n=28;
Epsilonproteobacteria|Rep: 50S ribosomal protein L4 -
Helicobacter pylori (Campylobacter pylori)
Length = 215
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
A +K RAEV GGG+KPW QKG GRAR GSI SP+F GGGV+HG + +++ + +
Sbjct: 47 AKSKNRAEVSGGGRKPWAQKGGGRARAGSITSPVFVGGGVSHGATNNRNYNLKINKKQKR 106
Query: 598 HGLTTTLSAKLAQDDLHIVKDLEL 669
L L K + L +V+ + +
Sbjct: 107 LALEYALEEKAQANKLFVVEKIAI 130
>UniRef50_Q6UCS1 Cluster: Ribosomal protein L4; n=1; uncultured
marine alpha proteobacterium HOT2C01|Rep: Ribosomal
protein L4 - uncultured marine alpha proteobacterium
HOT2C01
Length = 229
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/136 (30%), Positives = 73/136 (53%)
Frame = +1
Query: 286 NLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKP 465
++ ++ KK G + L ++ + + ++ S V W + A TK R+EV+G +K
Sbjct: 27 DMHKIDGKKSGSVNLKDQLFNSKSGLSVVGSLVRWSESNQKPLRARTKNRSEVKGTTQKL 86
Query: 466 WPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDL 645
QKG G ARHGS ++ +FR GG+AH R +S +P R L + KL ++L
Sbjct: 87 GRQKGSGGARHGSKKANIFRSGGMAHNLRGVRS-LKKMPKRTRQEALKHIFADKLKNNNL 145
Query: 646 HIVKDLELPTDESQYL 693
IV++L++ +++ L
Sbjct: 146 IIVEELKIEEPKTKIL 161
>UniRef50_A5USI8 Cluster: Ribosomal protein L4/L1e; n=5; Chloroflexi
(class)|Rep: Ribosomal protein L4/L1e - Roseiflexus sp.
RS-1
Length = 223
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/107 (35%), Positives = 62/107 (57%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLG 486
+++G+I++ V+ P + ++H + QR + +T R EV G +K + QKG G
Sbjct: 11 EEVGVIQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKGTG 70
Query: 487 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAK 627
RAR GSIR+P +GGG+AHGP K + +P +R + + LSA+
Sbjct: 71 RARQGSIRAPHRKGGGIAHGPHPRK-YTKAMPRKMRRLAVRSALSAR 116
>UniRef50_A5KRQ2 Cluster: Ribosomal protein L4/L1e; n=1; candidate
division TM7 genomosp. GTL1|Rep: Ribosomal protein
L4/L1e - candidate division TM7 genomosp. GTL1
Length = 199
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1
Query: 412 SWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSH 567
S A TK R EVRGGG+KP QKG GRAR GSIRSPL+RGGGV GP +++
Sbjct: 35 SAASTKKRGEVRGGGRKPHKQKGTGRARAGSIRSPLWRGGGVTFGPSGNENY 86
>UniRef50_Q83FY7 Cluster: 50S ribosomal protein L4; n=2; Tropheryma
whipplei|Rep: 50S ribosomal protein L4 - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 248
Score = 72.9 bits (171), Expect = 7e-12
Identities = 41/114 (35%), Positives = 62/114 (54%)
Frame = +1
Query: 313 LGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRA 492
+G ++L ++ + P + +IH V+ Q+ TK+RAEV G G+KP+ QKG G A
Sbjct: 15 VGTLQLVGHLFDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGTGNA 74
Query: 493 RHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
R GS R+P RGGGV HGP +++ P + L L+ + +HIV
Sbjct: 75 RCGSTRAPQMRGGGVVHGP-VPRNYVHRTPKKMIKAALAGCLTNRARAGRVHIV 127
>UniRef50_Q2S3R3 Cluster: 50S ribosomal protein L4; n=1;
Salinibacter ruber DSM 13855|Rep: 50S ribosomal protein
L4 - Salinibacter ruber (strain DSM 13855)
Length = 215
Score = 72.9 bits (171), Expect = 7e-12
Identities = 49/146 (33%), Positives = 74/146 (50%)
Frame = +1
Query: 271 EVWIENLDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRG 450
+V I D VE + ++ P V+ P II +V + ++ + TK R EVRG
Sbjct: 2 DVEIYQEDGVESGETAALD--PTVFDIEPNDHIIWLDVKRIQAHQRQGTSKTKERGEVRG 59
Query: 451 GGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKL 630
G+K + QKG G AR G +SP+ RGGG AHG R + RL + LS K
Sbjct: 60 SGRKLYRQKGTGNARVGDAQSPIRRGGGRAHGARPRDYAHDLNQKEKRL-ARRSALSYKA 118
Query: 631 AQDDLHIVKDLELPTDESQYLVDLIE 708
A D++ ++++ L +++ L DL E
Sbjct: 119 ANDNIQVIENFSLDRPDTRGLTDLFE 144
>UniRef50_UPI00015BD7F8 Cluster: UPI00015BD7F8 related cluster; n=1;
unknown|Rep: UPI00015BD7F8 UniRef100 entry - unknown
Length = 200
Score = 72.5 bits (170), Expect = 9e-12
Identities = 42/114 (36%), Positives = 59/114 (51%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
+EL V+ P+ I+ V WQ R TKTRAEV KK PQKG G ARHG
Sbjct: 6 VELRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNARHG 65
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL 663
+ + +F GGGV HGP + + + + L R L LS K + +++++ L
Sbjct: 66 ARSANIFVGGGVVHGP-TPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESL 118
>UniRef50_Q0TWI7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 562
Score = 72.5 bits (170), Expect = 9e-12
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 352 PPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGG 531
P R DI+H V+++ + A TKTR EV G +K PQKG GRAR G +SP+ RGG
Sbjct: 100 PTRRDILHRAVVYEGDSTRLGTASTKTRYEVHGSRRKIRPQKGSGRARLGDRKSPMLRGG 159
Query: 532 GVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD-LELPTDESQYLVDLIE 708
GVA GP+ + LP + T LS + + +L IV + +E+ + + L D+ +
Sbjct: 160 GVAFGPKP-RDFATELPKKVYDLAWRTALSYRFRKGELIIVDNAIEIESPSPRLLGDIFK 218
>UniRef50_A1CBM7 Cluster: 50S ribosomal protein L4; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L4 -
Aspergillus clavatus
Length = 292
Score = 72.5 bits (170), Expect = 9e-12
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Frame = +1
Query: 199 TTANKTINILKKEWEFPPLYT-KPREVWIENLDSVEEKKLGLIELHPMVYAAPPRIDIIH 375
T A T L +E P T +P V + L +IE P R DI+H
Sbjct: 42 TEAQSTTEYLTREAPTVPKPTWEPAPVKATAYSFPSMEPLRVIEYPRNHLLMPLRKDILH 101
Query: 376 SNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRS 555
V+++ A TK RA+V G KK + QKG GRAR G +SP+ RGGGVA GP
Sbjct: 102 RAVVYEGDMTRQGTASTKWRADVHGSNKKLYAQKGTGRARAGDKKSPIRRGGGVAFGPHP 161
Query: 556 GKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV-KDLELPTDESQYLVDLI 705
+ LP + LS + + L I+ ++ +P D + +L+ I
Sbjct: 162 -RDFATSLPQKIYDQAWRIALSYRYKRGQLIIIDNEISIPEDATPHLIQEI 211
>UniRef50_A7BY81 Cluster: Ribosomal protein L4/L1e; n=2;
Gammaproteobacteria|Rep: Ribosomal protein L4/L1e -
Beggiatoa sp. PS
Length = 218
Score = 72.1 bits (169), Expect = 1e-11
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +1
Query: 271 EVWIENLDSVEEKKLG-LIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVR 447
E+ + NL E LG +I + V+ AP +IH V + S K RA+VR
Sbjct: 2 ELTLTNLPD-ETSGLGSVISVSDRVFTAPFNEPLIHQAVTAYLLGSYQSQKSVKNRAQVR 60
Query: 448 GGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAK 627
G KPW QKG GRAR GS++SPL+RGGGV S SH L + L + LS
Sbjct: 61 GSTAKPWRQKGTGRARAGSVKSPLWRGGGVTFAHPS--SHAVKLNRKMYQGALRSILSEL 118
Query: 628 LAQDDLHIVKDLELPTDESQYL 693
+ Q+ L + + L ++ L
Sbjct: 119 IRQERLLVTERFFLEAPKTSVL 140
>UniRef50_Q84U22 Cluster: Ribosomal protein L4; n=1; Chlamydomonas
reinhardtii|Rep: Ribosomal protein L4 - Chlamydomonas
reinhardtii
Length = 243
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++H ++ ++ A T TR+EVRGGGKKP+ QKG G AR GS SPLF GGGV G
Sbjct: 58 LVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFPGGGVTFG 117
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL--ELPTDESQYLVDLIE 708
P+ M RL L T L + A D+ +V+ L +L +++ +V L+E
Sbjct: 118 PKPKDWSISMNKKERRL-ALATALQSATA--DMIVVESLAGKLQDTKTKSMVALLE 170
>UniRef50_O46895 Cluster: Chloroplast 50S ribosomal protein L4; n=1;
Guillardia theta|Rep: Chloroplast 50S ribosomal protein
L4 - Guillardia theta (Cryptomonas phi)
Length = 223
Score = 71.7 bits (168), Expect = 2e-11
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
A TKTR+EV GGGKKPW QKG G AR GS SPL++GGGV GP+ ++ RL
Sbjct: 59 ACTKTRSEVEGGGKKPWKQKGTGNARAGSSNSPLWKGGGVTFGPKP-RTFSNKTNKKERL 117
Query: 598 HGLTTTLSAKLAQDDLHIVKDLELPTDESQYLV----DLIEN 711
LTT L K + + +L+ +++ LV +LIEN
Sbjct: 118 LALTTALYLKSNNTKVINLDNLDFTNLKTRDLVIKCSNLIEN 159
>UniRef50_Q5PIV3 Cluster: 50S ribosomal protein L4; n=72;
Bacteria|Rep: 50S ribosomal protein L4 - Salmonella
paratyphi-a
Length = 201
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
KTRAEV G GKKPW QKG GRAR GSI+SP++R GGV R + H + + L
Sbjct: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGAL 105
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ LS + QD L +V+ + +++ L +++
Sbjct: 106 KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKD 140
>UniRef50_Q2GED8 Cluster: 50S ribosomal protein L4; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L4 - Neorickettsia sennetsu (strain Miyayama)
Length = 214
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/136 (32%), Positives = 68/136 (50%)
Frame = +1
Query: 289 LDSVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPW 468
LD G + + + AP R D++ + WQ R TK +EV G +KP+
Sbjct: 9 LDFGASSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPY 68
Query: 469 PQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLH 648
QKG GRAR GS+R+P FR GG+ GP + H F + +R L + LS + A+ L
Sbjct: 69 RQKGTGRARQGSLRAPQFRKGGIVFGP-VVRQHGFSVNKKVRSLALRSALSMRFAEGRLF 127
Query: 649 IVKDLELPTDESQYLV 696
+++ L ++ L+
Sbjct: 128 VLESSRLGESKAATLL 143
>UniRef50_A6PR86 Cluster: Ribosomal protein L4/L1e; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein L4/L1e -
Victivallis vadensis ATCC BAA-548
Length = 209
Score = 70.9 bits (166), Expect = 3e-11
Identities = 41/114 (35%), Positives = 62/114 (54%)
Frame = +1
Query: 370 IHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
+H V+ + A TKTR EV GGG KP+ QKG+GRAR GS RSP++ GGG GP
Sbjct: 34 VHDTVVAYLAGQRAGTACTKTRGEVSGGGAKPFRQKGMGRARAGSSRSPVWVGGGTIFGP 93
Query: 550 RSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
R +S + + L LS ++ + DL ++ EL +++ +++N
Sbjct: 94 RP-RSFAKKVNKKVLQLALKRALSERIVEGDLVLLDKFELADHKTRNAFAILKN 146
>UniRef50_Q4A5C2 Cluster: 50S ribosomal protein L4; n=2; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L4 - Mycoplasma
synoviae (strain 53)
Length = 229
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = +1
Query: 370 IHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
I +++ +R R K RA V G GKKPW QKG GRARH S RSP++ GGG A GP
Sbjct: 52 IFDSILSERASRRQGTHQVKNRAAVSGSGKKPWKQKGTGRARHSSRRSPIWVGGGRAFGP 111
Query: 550 RSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLEL 669
+S K++ + ++ + L+ L D +V+D ++
Sbjct: 112 QSVKNYSLKVNKKVKQLAFRSALT-MLVNDKAVLVEDFKM 150
>UniRef50_Q8KAH3 Cluster: 50S ribosomal protein L4; n=10;
Bacteroidetes/Chlorobi group|Rep: 50S ribosomal protein
L4 - Chlorobium tepidum
Length = 208
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/95 (40%), Positives = 56/95 (58%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
KTRAEVRGGGKKP+ QKG G AR GS RS L GGG GP+ +++ + ++
Sbjct: 52 KTRAEVRGGGKKPFRQKGTGNARQGSTRSGLMVGGGAIFGPQP-RTYDQKVNRKVKQLAR 110
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ LSAK A + +V D +++ + D+++N
Sbjct: 111 RSALSAKAAAGQIVVVDDFSFEAIKTRPVADMLKN 145
>UniRef50_Q7XYP3 Cluster: Ribosomal protein rpL4; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL4 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 335
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/100 (36%), Positives = 57/100 (57%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++H +++ R A TKT++EVRGGGKKP+ QK G AR GS R+PL GGG+ G
Sbjct: 142 LVHRYLMYARNSMRAGTASTKTKSEVRGGGKKPYQQKKTGNARQGSRRTPLKPGGGIIFG 201
Query: 547 PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
P K + + + + + + + A D+ +V+DL+
Sbjct: 202 P---KPRDWSVDMNQKERRIAMATALQSASSDVILVEDLD 238
>UniRef50_Q6ME62 Cluster: Putative 50S ribosomal protein L4; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative 50S ribosomal protein L4 - Protochlamydia
amoebophila (strain UWE25)
Length = 196
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/96 (38%), Positives = 53/96 (55%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
A TKTRAEV+ KK PQKG GRARHGS +P +RGGG A GPR + R
Sbjct: 18 ASTKTRAEVKHTTKKAHPQKGQGRARHGSTVAPQYRGGGRAFGPRPKFDQHVRINKKERK 77
Query: 598 HGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLI 705
+ LS KL ++ + +++D + +++ L +
Sbjct: 78 AAIRFLLSEKLKENKVWLIEDTAMDAPKTKTLAQFL 113
>UniRef50_Q7RXV7 Cluster: Putative uncharacterized protein
NCU01474.1; n=4; Sordariomycetes|Rep: Putative
uncharacterized protein NCU01474.1 - Neurospora crassa
Length = 349
Score = 68.5 bits (160), Expect = 2e-10
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Frame = +1
Query: 352 PPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGG 531
P R DI+H VI++ A TKTR EV G KK PQKG G AR G+ +SPL +GG
Sbjct: 115 PLRRDILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQKGTGNARRGTRQSPLMKGG 174
Query: 532 GVAHGPRSGKSHFFMLPFHLRLHGLT--TTLSAKLAQDDLHIVKD-LELP 672
G GP K F + +++ L T LS + + +L + +D L+LP
Sbjct: 175 GKTFGP---KPRDFSTKLNKKVYDLAWRTALSYRYKRGELIVTEDGLDLP 221
>UniRef50_Q54RB5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 258
Score = 68.1 bits (159), Expect = 2e-10
Identities = 54/173 (31%), Positives = 80/173 (46%)
Frame = +1
Query: 178 NSAAVTTTTANKTINILKKEWEFPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPP 357
NS TTTT T+ +K+ K EV + N + + + I+L V++ P
Sbjct: 22 NSLKYTTTTTTTTV---QKKTAAQLFADKTIEVPVLNFND-KLSPIENIQLSKDVFSVPL 77
Query: 358 RIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 537
R+D++H V +QR + KKP QKG G AR G+ S FRGG
Sbjct: 78 RVDLLHRMVRYQRAKSQQGTHQALNMGRMERTNKKPTRQKGSGNARKGTNHSVHFRGGAR 137
Query: 538 AHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLV 696
P + +SH LP +R L LS KLAQ+ L +V L + +++ L+
Sbjct: 138 TFAP-TMRSHAHDLPRKVRKLCLKVALSTKLAQNKLVVVDGFNLESHKTKELL 189
>UniRef50_Q5ZYP2 Cluster: 50S ribosomal protein L4; n=6;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 202
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/115 (33%), Positives = 60/115 (52%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
++L+ ++A ++H V+ + KTR+EV GGGKKPW QKG GRAR G
Sbjct: 13 LKLNKEIFAYTYNEGLVHQAVVTFMNNARSGNSAQKTRSEVSGGGKKPWNQKGTGRARAG 72
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
+IRSPL+R GGV + + + L + L + +S +L +V D +
Sbjct: 73 TIRSPLWRSGGVTFASKK-RDYSQKLNKKMYKRALRSIISELCRTGNLVVVSDFQ 126
>UniRef50_Q1VLV8 Cluster: 50S ribosomal protein L4; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L4 - Psychroflexus torquis ATCC 700755
Length = 207
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFF--MLPFHLRL 597
++ R+ VRGGGKKPW QKG G AR G+IRSPL++GGG GP + H + LP +
Sbjct: 50 SRNRSAVRGGGKKPWKQKGRGVARAGTIRSPLWKGGGAVFGP---EPHVYNKKLPKKMSK 106
Query: 598 HGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ L+ K+ +L ++ + + + ++ + +E+
Sbjct: 107 LARKSVLTKKVQDKELVVLDSINISSKKTADFISFMES 144
>UniRef50_Q3ZZM3 Cluster: 50S ribosomal protein L4; n=3;
Dehalococcoides|Rep: 50S ribosomal protein L4 -
Dehalococcoides sp. (strain CBDB1)
Length = 210
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/128 (31%), Positives = 63/128 (49%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
I + V+ P ++H + Q+ TKTR EV+G +K + QKG G AR G
Sbjct: 16 INISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSSRKIYRQKGTGNARMG 75
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDE 681
+ RSP+ R GGVA GPR + LP +R + LS KL +L ++ L +
Sbjct: 76 TNRSPVRRHGGVAFGPRP-RDFSKDLPKKMRRQAIRCVLSFKLESGELKVIDQLSFDEPK 134
Query: 682 SQYLVDLI 705
++ + ++
Sbjct: 135 TRDMAKIL 142
>UniRef50_A4S817 Cluster: Plastid ribosomal protein L4 large
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein L4 large
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 251
Score = 66.9 bits (156), Expect = 5e-10
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Frame = +1
Query: 367 IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++H V+ R+ A T T++EVRGGG+KP+ QKG G AR GS R+PL GGGV+ G
Sbjct: 67 LVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGNARAGSSRTPLKPGGGVSFG 126
Query: 547 PRSGKSHFFMLPFHLRL---HGLTTTLSAKLAQDDL 645
P+ M RL L + SA + DD+
Sbjct: 127 PKPRDWSIKMNKKERRLAMATALQSAASAMIVVDDI 162
>UniRef50_Q5KM69 Cluster: Ribosomal protein L4, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L4,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 406
Score = 66.9 bits (156), Expect = 5e-10
Identities = 44/115 (38%), Positives = 58/115 (50%)
Frame = +1
Query: 319 LIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARH 498
+I L P V+A P R DI+H V+W TK+R+ V G+K PQKG G+AR
Sbjct: 125 VIALPPDVFAQPIRRDILHRCVVWYLSQLRSGTKSTKSRSTVAYSGRKLIPQKGTGKARA 184
Query: 499 GSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL 663
G S RGG H P K+ LP +R G+ LS+KL L +V +L
Sbjct: 185 GDASSGTRRGGAPIH-PIFPKNWAQALPRKVRELGMRVALSSKLKAGLLRVVPNL 238
>UniRef50_Q8DE40 Cluster: 50S ribosomal protein L4; n=46;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Vibrio vulnificus
Length = 200
Score = 66.5 bits (155), Expect = 6e-10
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
KTR+EV GGG KPW QKG GRAR G+IRSPL+R GGV + + H + + +
Sbjct: 46 KTRSEVSGGGAKPWRQKGTGRARAGTIRSPLWRTGGVTFAAKP-QDHSQKVNKKMYRGAM 104
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYLV 696
+ LS + Q+ L +V + + +++ LV
Sbjct: 105 KSILSELVRQERLIVVDNFSVEAPKTKELV 134
>UniRef50_Q4FUF5 Cluster: 50S ribosomal protein L4; n=15;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Psychrobacter arcticum
Length = 200
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVA 540
KTRAEV GGG KPW QKG GRAR GSIRSP++RGGG A
Sbjct: 46 KTRAEVSGGGIKPWRQKGTGRARAGSIRSPIWRGGGRA 83
>UniRef50_Q8EUB4 Cluster: 50S ribosomal protein L4; n=3;
Mycoplasma|Rep: 50S ribosomal protein L4 - Mycoplasma
penetrans
Length = 213
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +1
Query: 370 IHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
I ++V+ + S A T T+AEVRGGG+KP+ QK GRAR GSIR+P + GGG A GP
Sbjct: 36 IFNSVLVEEANSRQSTASTLTKAEVRGGGRKPYKQKHTGRARQGSIRNPHYVGGGRAFGP 95
Query: 550 RSGKSH 567
K++
Sbjct: 96 SPEKNY 101
>UniRef50_Q2IJ86 Cluster: 50S ribosomal protein L4; n=4;
Cystobacterineae|Rep: 50S ribosomal protein L4 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 206
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +1
Query: 298 VEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHT-KTRAEVRGGGKKPWPQ 474
+ +KK+G ++L V+A + + V+ + S H K R+ V GGGKKPW Q
Sbjct: 9 LSKKKVGELDLADAVFAGEVNEHLFYE-VVKAKLASDRSGTHAVKNRSLVSGGGKKPWKQ 67
Query: 475 KGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV 654
K GRAR GS R+ + GGG A GP+ + + + +P +R L + L+ + L IV
Sbjct: 68 KHTGRARQGSTRASQWVGGGKAMGPKP-RDYSYDVPKKVRKAALRSALALRSKDQKLVIV 126
Query: 655 KD 660
++
Sbjct: 127 QE 128
>UniRef50_Q7VQE7 Cluster: 50S ribosomal protein L4; n=6;
Gammaproteobacteria|Rep: 50S ribosomal protein L4 -
Blochmannia floridanus
Length = 212
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/95 (33%), Positives = 55/95 (57%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
K+R++V G KKPW QKG GRAR GS++SP++R GGV + K + + + +
Sbjct: 56 KSRSDVSGSNKKPWRQKGTGRARSGSVKSPIWRSGGVTFASKP-KKYDQKINKKMYKGAM 114
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
+ LS + + L +++DL L ++ L+ ++N
Sbjct: 115 KSILSKLVCDNRLFLIEDLFLEKPKTNLLLKKLKN 149
>UniRef50_Q1AU30 Cluster: Ribosomal protein L4/L1e; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Ribosomal protein L4/L1e -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 211
Score = 62.5 bits (145), Expect = 1e-08
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
+EL + P+ +IH V+ + + R A T+ R+EV G G K + QKG GRAR G
Sbjct: 17 MELKGPRFETEPKQHVIHRAVVAELEARRRWTASTRERSEVAGSGAKLYRQKGTGRARAG 76
Query: 502 SIRSPLFRGGGVAHGPR-SGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTD 678
I+SPL GGG GP+ G + + LSAK A+ L+++ L+
Sbjct: 77 DIKSPLRHGGGTWGGPKPKGPRYGKKINRKEARAAFDGALSAKAAEGRLYVLDALDFERP 136
Query: 679 ESQYLVDLI 705
++ +L+
Sbjct: 137 STKRAKELL 145
>UniRef50_O50061 Cluster: 50S ribosomal protein L4, chloroplast
precursor; n=13; cellular organisms|Rep: 50S ribosomal
protein L4, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 282
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRID--IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPW 468
S E +K+G E + + AAP ++H ++ + A T TR EVRGGG KP+
Sbjct: 58 SFEGEKVG--ETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPY 115
Query: 469 PQKGLGRARHGSIRSPLFRGGGVAHGPR 552
QK G AR GS R+PL GGGV GPR
Sbjct: 116 SQKKTGHARRGSQRTPLRPGGGVVFGPR 143
>UniRef50_Q62GK6 Cluster: 50S ribosomal protein L4; n=71;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Burkholderia mallei (Pseudomonas mallei)
Length = 206
Score = 57.6 bits (133), Expect = 3e-07
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 367 IIHSNVI-WQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGG--V 537
+IH V+ +Q R + A K R +V+ KKPW QKG GRAR G SPL+RGGG
Sbjct: 31 LIHQVVVAYQANARQGNRAQ-KDREQVKHTTKKPWRQKGTGRARAGMSSSPLWRGGGRIF 89
Query: 538 AHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVD 699
+ P SH H GL + S + L +V+D+ L +++ L D
Sbjct: 90 PNSPDENFSHKVNKKMHRA--GLCSIFSQLAREGRLSVVEDIVLEAPKTKLLAD 141
>UniRef50_Q5P331 Cluster: 50S ribosomal protein L4; n=26;
Proteobacteria|Rep: 50S ribosomal protein L4 - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 206
Score = 56.4 bits (130), Expect = 7e-07
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFM-LPFHLRLHG 603
K RAEV +KPW QKG GRAR G SPL+RGGG P S + +F L + G
Sbjct: 51 KGRAEVSKSTRKPWRQKGTGRARAGMASSPLWRGGGRVF-PNSPEDNFSQKLNRKMYRAG 109
Query: 604 LTTTLSAKLAQDDLHIVKDLELPTDESQYL 693
+ + LS +D L IV++ + +++ L
Sbjct: 110 VASILSQLAREDRLAIVENFSVEAPKTRLL 139
>UniRef50_O74801 Cluster: Mitochondrial ribosomal protein subunit
Yml6; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit Yml6 - Schizosaccharomyces
pombe (Fission yeast)
Length = 261
Score = 56.0 bits (129), Expect = 9e-07
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Frame = +1
Query: 358 RIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 537
R DI+H VI++ A +K R E+ G+K + QKG G AR G SP+ RGG
Sbjct: 34 RRDILHRAVIYEADNDRQGTASSKRRNEITCSGRKLYRQKGTGHARVGDASSPIRRGGAK 93
Query: 538 AHGPRSGKSHFFMLPFHLRLHGLT--TTLSAKLAQDDLHIVKD-LELPTDESQYLVDLIE 708
+HGP K F +++ L LS + ++L I+++ + L +++ L+++++
Sbjct: 94 SHGP---KPRDFSTKLQTQVYNLAMRIALSTRFINNELTILENPINLSQPKTRILLEVLK 150
>UniRef50_Q7UN19 Cluster: 50S ribosomal protein L4; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L4 -
Rhodopirellula baltica
Length = 222
Score = 56.0 bits (129), Expect = 9e-07
Identities = 33/135 (24%), Positives = 67/135 (49%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLG 486
K++G E+ A ++H V+ + + +T+TR +V G KK + QKG G
Sbjct: 12 KEVGQYEIDTEQIANRVSKQLLHDVVVMYQANKRQGSHNTRTRGQVSGTNKKMYRQKGTG 71
Query: 487 RARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLE 666
AR GS R+ + RGGGVA + + + + LP + +++ ++ ++ +L+
Sbjct: 72 NARAGSKRTNVRRGGGVARTVKP-RDYSYRLPKKAIKIATRMAIRSRIDDGEIVVINELK 130
Query: 667 LPTDESQYLVDLIEN 711
L ++ + +++N
Sbjct: 131 LDAPKTSQIAQILKN 145
>UniRef50_Q8KTP1 Cluster: Ribosomal protein L4; n=1; Candidatus
Tremblaya princeps|Rep: Ribosomal protein L4 - Tremblaya
princeps
Length = 198
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/89 (35%), Positives = 44/89 (49%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
++R EV +KPW QKGLGRAR G SPL+RGGG A R+ S + + L
Sbjct: 42 RSRGEVSHSTRKPWRQKGLGRARAGMTSSPLWRGGGRAFPSRTAASRLVRINKRMARLSL 101
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYL 693
+ Q L IV L + +++ L
Sbjct: 102 HVQIVRAARQGRLAIVDALRIAPSKTREL 130
>UniRef50_Q4FLL9 Cluster: 50S ribosomal protein L4; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L4 -
Pelagibacter ubique
Length = 207
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPR 552
A TK + E+ G K + QKG G ARH S ++P+F GGGVAHGP+
Sbjct: 47 AKTKQQNEITGSTSKIYAQKGTGGARHASRKAPIFVGGGVAHGPK 91
>UniRef50_Q00UM3 Cluster: Chromosome 16 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 367
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = -3
Query: 548 GPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPPRTSALVLVCAQETHLYFLCH 387
GP TPPP G +EP A P PFC +GF PPPRTS V V A Y + H
Sbjct: 118 GPNDTPPPGLSGVRLEPARALPVPFCLNGFRPPPRTSLFVSVLAVPCESYEIVH 171
>UniRef50_Q5L719 Cluster: 50S ribosomal protein L4; n=8;
Chlamydiaceae|Rep: 50S ribosomal protein L4 -
Chlamydophila abortus
Length = 224
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRL 597
A T+ R+EV KKP+ QKG G AR G + +P FRGGG+ GP+ + +
Sbjct: 50 ACTRNRSEVSHSTKKPFRQKGTGNARQGCLAAPQFRGGGIVFGPKPKFDQHVRINKKEKR 109
Query: 598 HGLTTTLSAKLAQDDLHIVKD 660
+ LS K+ + L + D
Sbjct: 110 AAIRLLLSQKIQTNHLIVADD 130
>UniRef50_Q9AIG3 Cluster: Ribosomal protein L4; n=4; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L4 - Carsonella
ruddii
Length = 172
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1
Query: 421 HTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGV 537
+ K R V G GKKPW QKG GRAR G +SP++R GGV
Sbjct: 39 YKKNRRLVFGSGKKPWIQKGTGRARAGDKKSPIWRSGGV 77
>UniRef50_Q7MTL4 Cluster: 50S ribosomal protein L4; n=29; cellular
organisms|Rep: 50S ribosomal protein L4 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 209
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/122 (27%), Positives = 56/122 (45%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
+ L ++A P I+ +V + K R+E+ G +K QKG G AR G
Sbjct: 17 VVLDDSIFAIEPNDHAIYLDVKQYMANQRQGTHKAKERSELSGSTRKLIRQKGSGGARRG 76
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDE 681
I SPL GG GPR +++ F L L+ + LS K +++ +V+D +
Sbjct: 77 DINSPLLSGGARVFGPRP-RNYSFKLNKKLKALARRSALSYKAKNNEIIVVEDFNFDAPK 135
Query: 682 SQ 687
++
Sbjct: 136 TK 137
>UniRef50_P51998 Cluster: 54S ribosomal protein YmL6, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 54S ribosomal
protein YmL6, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 286
Score = 51.2 bits (117), Expect = 2e-05
Identities = 49/170 (28%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
Frame = +1
Query: 184 AAVTTTTANKTINILKKEWEFPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPPRI 363
A T A T+N L PP Y V + + S+E L + + AAP R
Sbjct: 18 ATTATAHAESTLNPLPNA-AIPPKYAL---VTVRSFPSLEP--LTFVPVPTSTVAAPLRR 71
Query: 364 DIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAH 543
DI+ V+++ R V ++ R+E +K PQKG GRAR G SP GG A
Sbjct: 72 DILWRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQKGSGRARVGDANSPTRHNGGRAL 131
Query: 544 GPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIV----KDLELPTDE 681
+ + LP + LS + L ++ DL PT E
Sbjct: 132 ARTAPNDYTTELPSKVYSMAFNNALSHQYKSGKLFVIGGEKVDLISPTPE 181
>UniRef50_Q1NYY2 Cluster: 50S ribosomal protein L4; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 50S
ribosomal protein L4 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 207
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 424 TKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHG 603
+K R+E+ G KK QKG G AR G I++P+FR GG GP+ ++ ++ +
Sbjct: 50 SKERSEITGSTKKIQRQKGSGNARKGDIKNPIFRSGGRIFGPKP-RNFNIIINNKSKFLA 108
Query: 604 LTTTLSAKLAQDDLHIVKDLE 666
T L+ KL + + +++D +
Sbjct: 109 KKTILNFKLRTNKIKVIEDFK 129
>UniRef50_Q82X87 Cluster: 50S ribosomal protein L4; n=24;
Proteobacteria|Rep: 50S ribosomal protein L4 -
Nitrosomonas europaea
Length = 206
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/95 (28%), Positives = 49/95 (51%)
Frame = +1
Query: 427 KTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGL 606
K R++V G +K W QKG GRAR G+ +PL+RGGG + ++ L + G+
Sbjct: 51 KGRSDVTGSTRKQWRQKGTGRARTGAATNPLWRGGGKIFPNKPTENFKQKLNRKMYRAGM 110
Query: 607 TTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIEN 711
T S L + L + + ++ +++ + ++N
Sbjct: 111 CTIFSELLRNNKLVAIDEFQIEMPKTKVCLQKLKN 145
>UniRef50_Q7YN80 Cluster: Ribosomal protein L4; n=1; Eimeria
tenella|Rep: Ribosomal protein L4 - Eimeria tenella
Length = 213
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 400 YRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRS 555
Y + ++T + + KKPW QKGLG AR GS +SPL++GG GP++
Sbjct: 62 YHKIKKSNTINKNNLSKSTKKPWKQKGLGMARSGSFKSPLWKGGIKLFGPKN 113
>UniRef50_Q5AFP9 Cluster: Likely mitochondrial ribosomal protein;
n=2; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 278
Score = 49.6 bits (113), Expect = 7e-05
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Frame = +1
Query: 175 LNSAAVTTTTANKTINILKKEWEF--PPLYTKPREVWIENLDSVEEKKLGLIELHPMVYA 348
++SAA TTTTA+ T F PP YT + + S+E K +
Sbjct: 15 ISSAAATTTTASTTSTTTTASLNFAKPPSYTLAQ---LREFPSLEPKTFIPLPTTFFNTE 71
Query: 349 APPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRG 528
P R DI+ S V ++ V + +++ +K PQKG GRAR G SP
Sbjct: 72 KPIRRDILWSCVTYEADKARVGSNYAILKSDSPYSNRKLRPQKGSGRARLGDANSPHMDN 131
Query: 529 GGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLI 705
AH + LP + G+ + Q +L++V++ EL + QY D+I
Sbjct: 132 EIKAHAIKGPHDWSTDLPSKIYSRGIQNAFTMHYKQGNLNVVEN-EL---DFQYGYDII 186
>UniRef50_A0CQM2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 318
Score = 44.0 bits (99), Expect = 0.004
Identities = 36/129 (27%), Positives = 56/129 (43%)
Frame = +1
Query: 322 IELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHG 501
I L ++ P R D++ V + Y T + G K PQK GRAR G
Sbjct: 50 IALDQEIFNQPIRRDLVQRLVRYTDLYDKKVTKATLALRDAAASGAKNHPQKKTGRARQG 109
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDE 681
+ P G AHG R +S LP +RL L+A L + ++ +L +
Sbjct: 110 HRQRPGRNKGIKAHG-RKIRSLRIDLPRKVRLQAYKVGLTAALIEGKFTVIDTEKLNEGK 168
Query: 682 SQYLVDLIE 708
+++LV L++
Sbjct: 169 TKHLVQLMK 177
>UniRef50_Q4EE76 Cluster: Ribosomal protein L4/L1 family; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Ribosomal
protein L4/L1 family - Listeria monocytogenes str. 4b
H7858
Length = 149
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/70 (31%), Positives = 42/70 (60%)
Frame = +1
Query: 502 SIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPTDE 681
SIRSP +RGGGV GP + +S+ + LP +R + + LS+K+ ++ L +++ L +
Sbjct: 19 SIRSPQWRGGGVVFGP-TPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPK 77
Query: 682 SQYLVDLIEN 711
++ ++N
Sbjct: 78 TKEFAAFLKN 87
>UniRef50_A3LWF5 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 245
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +1
Query: 349 APPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRG 528
AP R D + S V+++ V + T+ + KK PQKG G+AR G SP
Sbjct: 48 APTRRDFLWSAVVYEADKARVGSGYVPTKGDKLFSNKKLRPQKGSGKARVGDANSPTRDN 107
Query: 529 GGVAHG 546
G AHG
Sbjct: 108 GIKAHG 113
>UniRef50_Q06RI4 Cluster: 23S ribosomal protein L4; n=1; Brucella
cetaceae|Rep: 23S ribosomal protein L4 - Brucella
cetaceae
Length = 176
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +1
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
L R + GS ++ RGGG AHGP ++H LP + GL LSAK DL I+ D
Sbjct: 40 LARRQQGSHKAQ-GRGGGQAHGP-VVRNHDHDLPKKVLALGLRHALSAKAKASDLIIIDD 97
Query: 661 LELPTDESQYLV 696
L +++ LV
Sbjct: 98 LASADAKTKQLV 109
>UniRef50_Q25805 Cluster: Rpl4 protein; n=1; Plasmodium
falciparum|Rep: Rpl4 protein - Plasmodium falciparum
Length = 190
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 400 YRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGP 549
Y + HTK +++V KK QKGLG+AR + +SP+ + G GP
Sbjct: 48 YNIYMYKHTKNKSKVYFSNKKIRVQKGLGKARLKNFKSPVCKQGACNFGP 97
>UniRef50_A7HD33 Cluster: Hemerythrin HHE cation binding domain
protein; n=2; Anaeromyxobacter|Rep: Hemerythrin HHE
cation binding domain protein - Anaeromyxobacter sp.
Fw109-5
Length = 202
Score = 35.9 bits (79), Expect = 0.98
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 487 RARHGSIRSPLFRGGGVAHG-PRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDL 663
R HG LF VAHG PR+G ML H + L L+AK AQD DL
Sbjct: 52 RCHHGKEEDILF-AAMVAHGFPRNGGPVAVMLHEHAQGRALVGALAAKAAQDGPWTPADL 110
Query: 664 ELPTDESQYLVDLI 705
+ +D++ +L+
Sbjct: 111 QTISDDAAAYANLL 124
>UniRef50_Q9MTE6 Cluster: Ribosomal protein L4; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L4 - Toxoplasma gondii
Length = 211
Score = 35.9 bits (79), Expect = 0.98
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 418 AHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHG 546
++TK +A KK QKG G+AR GS +S L +GG VA G
Sbjct: 61 SNTKNKAFSSYSNKKLRQQKGSGKARIGSKKSVLQKGGSVAFG 103
>UniRef50_Q339M5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 246
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 438 RSSGWRQETVATERVGSRQTWLNKITPISWWRCSPWSSLRQIALLYATI 584
RS GW R G+R +W + SWW W S R + A +
Sbjct: 92 RSGGWPAGDGGPTRGGARGSWRRRRRSCSWWSSQQWCSRRHLETAAAVV 140
>UniRef50_Q4P7R0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1372
Score = 35.1 bits (77), Expect = 1.7
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +3
Query: 426 QDESRSS-----GWRQETVATERVGSRQTWLNKITPISWWRCSPWSSLRQIALLYATISS 590
QD +RS+ GW ET+ G+ + L+ + R PW+S+R LYA ++
Sbjct: 1246 QDHTRSTLDIPQGWASETML-RATGAPELILDILESALATRPQPWNSVRGHTFLYAEVAE 1304
Query: 591 *A-TWLNYNTVSQTSS 635
A TW+ +T S +S
Sbjct: 1305 FARTWIQLSTTSPLAS 1320
>UniRef50_A7DNT6 Cluster: Major facilitator superfamily MFS_1; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Major
facilitator superfamily MFS_1 - Candidatus
Nitrosopumilus maritimus SCM1
Length = 382
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 398 FLCHITLLWIMSILGGAA*TMGCN--SIKPSFFSSTLSKFSIQTSLGLVYSGGNSHSFFK 225
F+ + W +GG M N S FSSTLS I T +G V +GG + +F
Sbjct: 303 FMSLVGATWAFLFIGGNFHLMDNNPRSTSTGIFSSTLS---IATVVGPVIAGGIAFAFDY 359
Query: 224 MLIVLFAVVVVTAA 183
+ ++ FA+ ++ +A
Sbjct: 360 VAVMYFAIAIIVSA 373
>UniRef50_Q6ATT8 Cluster: Putative uncharacterized protein
OSJNBb0056O10.3; n=5; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0056O10.3 - Oryza sativa
subsp. japonica (Rice)
Length = 290
Score = 33.9 bits (74), Expect = 4.0
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAE-VRGGGKKPWP 471
SV EK+ + +A R D + + W + RW+ W AE R + W
Sbjct: 15 SVVEKQQRTTSSRLGIGSARARADACNDDDAWCLR-RWIEWRSVNLAAEGARRRHRLDWG 73
Query: 472 QKGLGRARHGSIRSPLFRGGGVAHG 546
+ G R L R GGV HG
Sbjct: 74 GRRCGGCRRAGATGRLRRWGGVRHG 98
>UniRef50_Q6IKC3 Cluster: HDC12883; n=1; Drosophila
melanogaster|Rep: HDC12883 - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 33.9 bits (74), Expect = 4.0
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 316 GLIELHP---MVYAAPPRIDIIHSNVIWQRKYRWVSWAHT-KTRAEVRGGGKKPWPQKGL 483
G++E HP + AP I+ + W R +R+ +WA T R G K WPQ+
Sbjct: 59 GVMEPHPPDPALKVAPTSAHIVLYSWAWSR-FRFWAWASTWANEPSPRNNGHKTWPQERS 117
Query: 484 GRAR 495
G R
Sbjct: 118 GSGR 121
>UniRef50_A1GGH0 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 526
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 246 STAVHQTQRGLDREFGQCRRKKTRLNRITSHGLCGST*DRHNPQQRYMAKK 398
ST +HQT R R+ R++ +R+T+H T H P+QR++ K
Sbjct: 290 STRLHQTTRIRQRQHTSHMRRRNLTHRMTTHKRRTHTPRLHQPKQRHLKSK 340
>UniRef50_Q8Q0G8 Cluster: Hypothetical sensory transduction histidine
kinase; n=1; Methanosarcina mazei|Rep: Hypothetical
sensory transduction histidine kinase - Methanosarcina
mazei (Methanosarcina frisia)
Length = 1584
Score = 33.5 bits (73), Expect = 5.2
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 121 LINAIKRLHVSPQIRLCSLNSAAVTTTTANKTINILKKEWEFPPLYTKPREVWIENL-DS 297
++ +K + Q + L AA T K LKK ++ + K R +E S
Sbjct: 924 ILQTVKAPYYDGQGNIIGLIGAARDITERKKAEEALKKAYDNLDILVKERTAELEKAYTS 983
Query: 298 VEEKKLGLIELHPMVYAAPPRIDIIHSNVIW 390
++E + GL E M + DI++ V W
Sbjct: 984 LKESEKGLAEAQRMAHIGNWEWDIVNGGVYW 1014
>UniRef50_Q0UK53 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 516
Score = 33.1 bits (72), Expect = 6.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 142 LHVSPQIRLCSLNSAAVTTTTANKTINILKKEWEFPPLY 258
L ++P ++LC+ A +T LKK+W+FP Y
Sbjct: 8 LLLAPGVQLCAAQEAMQALSTNETACTALKKDWDFPRAY 46
>UniRef50_UPI000023E898 Cluster: hypothetical protein FG02472.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG02472.1 - Gibberella zeae PH-1
Length = 1200
Score = 32.7 bits (71), Expect = 9.2
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -3
Query: 560 LPERGPWATPPPRNRGDLI-EPCLARPNPFCGHGFLPPPRTSA 435
+P + PWAT PP + I EP PF LPPP+ A
Sbjct: 319 VPVKSPWATLPPVEKASPIPEPATLARQPFNKGMTLPPPKEIA 361
>UniRef50_Q0J0Z3 Cluster: Os09g0475200 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0475200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 176
Score = 32.7 bits (71), Expect = 9.2
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +1
Query: 391 QRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKS 564
QR+ R A + GG + WP K G R G R ++ G GVA G +G S
Sbjct: 50 QRRRRGEVVAGRRAAVGCGGGEARWWPTKDGGGERRGGWRRKMWEGRGVAVGVAAGGS 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,658,464
Number of Sequences: 1657284
Number of extensions: 17749632
Number of successful extensions: 48016
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 46053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47971
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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