Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2d09
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 91 1e-18
12_02_0377 + 18342631-18342675,18343654-18343771,18344233-183443... 77 2e-14
03_02_0470 + 8723772-8724705,8724900-8724971,8725315-8725376 74 1e-13
10_06_0020 - 9693126-9693437,9694940-9695368 35 0.055
11_04_0272 - 15631598-15631898,15633162-15633291,15636394-156365... 29 2.8
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 29 2.8
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 29 2.8
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 2.8
02_05_0879 - 32444967-32445250,32445643-32445674,32445752-324458... 29 2.8
02_01_0120 + 884467-887649 29 3.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.8
12_02_0493 - 19677481-19677776,19678953-19679017,19679455-196795... 28 6.4
04_04_0284 + 24133397-24133483,24133843-24133979,24134311-241345... 28 6.4
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 28 8.4
10_07_0180 - 13879648-13880064 28 8.4
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 90.6 bits (215), Expect = 1e-18
Identities = 53/130 (40%), Positives = 73/130 (56%)
Frame = +1
Query: 316 GLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRAR 495
G + L V+ P R DI+H V TKT +EV G G+KP+ QKG GRAR
Sbjct: 152 GFMVLDGDVFDVPIRKDIVHR----------VGTHSTKTISEVSGTGRKPYNQKGTGRAR 201
Query: 496 HGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKDLELPT 675
HG++R P FRGG HGP+ +SH L +R GL LSA+ A+ L + DLE+P+
Sbjct: 202 HGTLRGPQFRGGATMHGPKP-RSHAIKLQKKVRRLGLKIALSARTAEGKLLVFDDLEVPS 260
Query: 676 DESQYLVDLI 705
+++ +V I
Sbjct: 261 HKTKNIVQYI 270
>12_02_0377 +
18342631-18342675,18343654-18343771,18344233-18344380,
18345142-18345220,18345330-18345449,18346112-18346285,
18346424-18346525
Length = 261
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 460 KPWPQKGLGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQD 639
KP+ QKG GRARHG++R P FRGG HGP+ +SH L +R GL LSA+ A+
Sbjct: 111 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKP-RSHAIKLQKKVRRLGLKIALSARTAEG 169
Query: 640 DLHIVKDLELPTDESQYLVDLI 705
L + +DLE+P+ +++ +V I
Sbjct: 170 KLLVFEDLEVPSHKTKNVVSYI 191
>03_02_0470 + 8723772-8724705,8724900-8724971,8725315-8725376
Length = 355
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +1
Query: 307 KKLGLIELHPMVYAAPPRID--IIHSNVIWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKG 480
+K+G + L + +APP ++H +I R+ + A T TR EVRGGG+KP+ QK
Sbjct: 75 EKVGEVALD--LKSAPPSTARAVVHRAIITDRQNKRRGTASTLTRGEVRGGGRKPYQQKK 132
Query: 481 LGRARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFHLRLHGLTTTLSAKLAQDDLHIVKD 660
G+AR GS+R+PL GGGV GP+ + RL ++T L++ DD +V++
Sbjct: 133 TGKARRGSMRTPLRPGGGVIFGPKPRDWSIKINRKEKRL-AISTALASAAVADDAFVVEE 191
Query: 661 LE 666
+
Sbjct: 192 FD 193
>10_06_0020 - 9693126-9693437,9694940-9695368
Length = 246
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 438 RSSGWRQETVATERVGSRQTWLNKITPISWWRCSPWSSLRQIALLYATI 584
RS GW R G+R +W + SWW W S R + A +
Sbjct: 92 RSGGWPAGDGGPTRGGARGSWRRRRRSCSWWSSQQWCSRRHLETAAAVV 140
>11_04_0272 -
15631598-15631898,15633162-15633291,15636394-15636544,
15636632-15636730,15636912-15637063,15637079-15637301
Length = 351
Score = 29.5 bits (63), Expect = 2.8
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 2/132 (1%)
Frame = +1
Query: 178 NSAAVTTTTANKTINILKKEWEFPPLYTKPREVWIENLDSVEEKKLGLIELHPMVYAAPP 357
N+ T N+TI LK +W YT W E D + +KKL + P YA+
Sbjct: 204 NTVVTDLKTRNQTIRFLKVQWSH---YTMDEATW-EKEDDL-QKKLASVFPSPR-YASQG 257
Query: 358 RIDIIHSNVIWQRKYRWVSWAHTKTRAEVRGGGK-KPWPQKGLGRARHGSIRSPL-FRGG 531
R + S + R Y ++GGG W + G G+ G +GG
Sbjct: 258 R-GGVPSCGSYSRGYGRRRLECGSGIGALQGGGDGGGWKRFGCGKGIRGMQGGGCDAQGG 316
Query: 532 GVAHGPRSGKSH 567
G A G +G+ +
Sbjct: 317 GGARGSDAGRDN 328
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 557 PERGPWATPPPRNRGDLIEPCLAR--PNPFCGHGFLPPPRTSAL 432
P+ PWA PP L +P + P+P G LPP + S L
Sbjct: 91 PKASPWAGSPPGAATHLQQPSRMKLSPSPAPGAQHLPPAKPSPL 134
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 557 PERGPWATPPPRNRGDLIEPCLAR--PNPFCGHGFLPPPRTSAL 432
P+ PWA PP L +P + P+P G LPP + S L
Sbjct: 91 PKASPWAGSPPGAATHLQQPSRMKLSPSPAPGAQHLPPAKPSPL 134
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = -3
Query: 545 PWATPPPRNRGDLIEPCLARPNPFCGHGFLPPPRTSALVLVCAQETHLYFL 393
PW P + G +++ + NPF + PP + + Q+ H++ L
Sbjct: 428 PWEAAAPASSGPMMQQPMQ--NPFYASNAIAPPLNVQMAAMAQQQQHMFML 476
>02_05_0879 -
32444967-32445250,32445643-32445674,32445752-32445809,
32445840-32445913,32446004-32446088,32447054-32447735
Length = 404
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -3
Query: 581 GSIKKCDLPERGPWATPPPR--NRGDLIEPCLARPNPFCGHGFLPPPRTSA 435
G +C P + P T PP N P L+ P P G +PPP + +
Sbjct: 304 GLQSRCPGPHQFPELTEPPTTVNHDSTFLPPLSAPGPAEAGGAIPPPNSGS 354
>02_01_0120 + 884467-887649
Length = 1060
Score = 29.1 bits (62), Expect = 3.6
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +1
Query: 415 WAHTKTRAEVRGGGKKPWPQK-GLGR-ARHGSIRSPLFRGGGVAHGPRSGKSHFFMLPFH 588
W H RA+V GGG PWP + + R A G V H R KS +L
Sbjct: 860 WLHE--RADVEGGGALPWPARLSIARGAARGLAHLHATSEPRVLH--RDIKSSNILLDAR 915
Query: 589 LRLHGLTTTLSAKL-AQDDLHIVKDL 663
L L+ + A DD H+ DL
Sbjct: 916 LEPRLADFGLARLVRAHDDTHVTTDL 941
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -3
Query: 575 IKKCDLPERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPP 447
+ C +P P PPP + P P P H LPPP
Sbjct: 594 LPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPP 636
>12_02_0493 -
19677481-19677776,19678953-19679017,19679455-19679594,
19680723-19680801,19683476-19683675
Length = 259
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 545 PWATPPPRNRGDLIEPCLARPNPFCGHG 462
PW TP NRG + PC + + HG
Sbjct: 193 PWQTPESNNRGAGVSPCCSPIDALPFHG 220
>04_04_0284 +
24133397-24133483,24133843-24133979,24134311-24134599,
24134723-24134829,24134905-24135052,24135260-24135458,
24135545-24135785,24135888-24135984,24136413-24136492,
24136533-24136551
Length = 467
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +1
Query: 112 ASILINAIKRLHVSPQIRLCSLNSAAVTTTTANKTINILKKEWEFPPLYTKPREVWIENL 291
A +++NA+ R + + L + + +T+ N+ + L EW F PL ++ EN
Sbjct: 302 AYVILNALLRSAKANSVGLLLSDGSEITSD--NRPKHTLY-EWFFDPLLVIKEQIKAENF 358
Query: 292 DSVEEKKLGLIELHPMVYAAPPRI 363
EEK L ++ ++ P R+
Sbjct: 359 TEEEEKYL---KMRVLLIGGPDRV 379
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -3
Query: 557 PERGPWATPPPRNRGDLIEPCLARPNPFCGHGFLPPPRTS 438
P+R + P RNRG A P P PPPR +
Sbjct: 31 PDRSSYVPPHLRNRGASSGGGAAAPPPSSSSSSAPPPRAA 70
>10_07_0180 - 13879648-13880064
Length = 138
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Frame = +1
Query: 295 SVEEKKLGLIELHPMVYAAPPRIDIIHSNVIWQRKYRWVSWAHTKTRAE-VRGGGKKPWP 471
SV EK+ + +A R D + + W + RW+ AE R + W
Sbjct: 15 SVVEKQQRTTSSRLGIGSARARADACNDDDAWCLR-RWIERRGVNLAAEGARRQRRLDWG 73
Query: 472 QKGLGRARHGSIRSPLFRGGGVAHG 546
+ G R L R GGV HG
Sbjct: 74 GRRCGGCRRAGATGRLRRWGGVRHG 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,371,778
Number of Sequences: 37544
Number of extensions: 531096
Number of successful extensions: 1529
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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