Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c19
         (772 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I720 Cluster: MRNA capping enzyme, putative; n=1; Pla...    34   3.4  
UniRef50_Q4P211 Cluster: Predicted protein; n=1; Ustilago maydis...    33   7.9  

>UniRef50_Q8I720 Cluster: MRNA capping enzyme, putative; n=1;
           Plasmodium falciparum 3D7|Rep: MRNA capping enzyme,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 520

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
 Frame = -2

Query: 324 NINREINVNSIMYKL*VNLAILIPETNT--QSLGARSR-RSTSNVDLLRASATQSKQRQE 154
           NIN++ N ++    L +N  ILI E N   Q++G      S +N +LL     + ++ +E
Sbjct: 247 NINQDFNNHNENNNLLMNQGILIDENNNGIQNIGTNDNINSLNNCNLLLYKREEHREEKE 306

Query: 153 YGNHEPDASV--DKTHYSKHGDRVCGALNIRMTLLVKDFY 40
           Y   E + S   D T  + H +       I   + +KDFY
Sbjct: 307 YEEEEDERSYSSDDTASTIHEE------EIPFEIYLKDFY 340


>UniRef50_Q4P211 Cluster: Predicted protein; n=1; Ustilago
           maydis|Rep: Predicted protein - Ustilago maydis (Smut
           fungus)
          Length = 358

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 198 LHCLSISCSVHQVIGCLFQVSEWPSSL 278
           LHC S+ C +H    CL Q ++WPS L
Sbjct: 74  LHCSSV-CHLHSASSCLAQDADWPSEL 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,951,247
Number of Sequences: 1657284
Number of extensions: 14912680
Number of successful extensions: 38792
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 37149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38771
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)