Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c19
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1382 - 29758759-29758806,29758888-29758943,29759901-297600...    29   4.1  

>06_03_1382 -
           29758759-29758806,29758888-29758943,29759901-29760000,
           29760107-29760220,29760807-29760854,29760959-29761021,
           29761237-29761439,29761518-29761578,29761685-29761790,
           29761920-29761987,29762344-29762418,29762507-29762589,
           29762788-29762953
          Length = 396

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 575 DLLYDGFVHRLQTYFLHGGFSG 510
           D+L+DG  HR++ + LH  F G
Sbjct: 323 DILFDGQTHRIKKFVLHTNFPG 344


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,404,173
Number of Sequences: 37544
Number of extensions: 428047
Number of successful extensions: 1090
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)