Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c18
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032136-1|AAH32136.1| 163|Homo sapiens chromosome 9 open readi... 100 5e-21
AL160270-18|CAI13161.1| 163|Homo sapiens chromosome 9 open read... 100 5e-21
BC007270-1|AAH07270.1| 199|Homo sapiens ribonuclease P 25kDa su... 73 7e-13
BC002497-1|AAH02497.1| 199|Homo sapiens ribonuclease P 25kDa su... 73 7e-13
AY034074-1|AAK54443.1| 199|Homo sapiens RNase P protein subunit... 73 7e-13
AK000381-1|BAA91128.1| 199|Homo sapiens protein ( Homo sapiens ... 72 2e-12
>BC032136-1|AAH32136.1| 163|Homo sapiens chromosome 9 open reading
frame 23 protein.
Length = 163
Score = 100 bits (239), Expect = 5e-21
Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = +1
Query: 85 MENYTKGKNVEQEFERDKIPIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVW 264
ME+Y K +VE P+ LP + L M+VR GSK+ NLL G LE +A VV+
Sbjct: 1 MEHYRKAGSVELPAPS---PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVF 57
Query: 265 SGVGAAISKTISCAEIIKRQFSIQHQVTKLLYQIVEEHWEPKI--EGLETLVVKRQIPAI 438
SG G A K +SCAEI+KR+ HQ+TKL + E+ W P GL+ L V+R +PA+
Sbjct: 58 SGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAV 117
Query: 439 HILLTSEPLKDFNQLGCQ 492
+LL+ +PL D N+ G Q
Sbjct: 118 WVLLSRDPL-DPNECGYQ 134
>AL160270-18|CAI13161.1| 163|Homo sapiens chromosome 9 open reading
frame 23 protein.
Length = 163
Score = 100 bits (239), Expect = 5e-21
Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = +1
Query: 85 MENYTKGKNVEQEFERDKIPIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVW 264
ME+Y K +VE P+ LP + L M+VR GSK+ NLL G LE +A VV+
Sbjct: 1 MEHYRKAGSVELPAPS---PMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVF 57
Query: 265 SGVGAAISKTISCAEIIKRQFSIQHQVTKLLYQIVEEHWEPKI--EGLETLVVKRQIPAI 438
SG G A K +SCAEI+KR+ HQ+TKL + E+ W P GL+ L V+R +PA+
Sbjct: 58 SGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAV 117
Query: 439 HILLTSEPLKDFNQLGCQ 492
+LL+ +PL D N+ G Q
Sbjct: 118 WVLLSRDPL-DPNECGYQ 134
>BC007270-1|AAH07270.1| 199|Homo sapiens ribonuclease P 25kDa
subunit protein.
Length = 199
Score = 73.3 bits (172), Expect = 7e-13
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +1
Query: 142 PIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVWSGVGAAISKTISCAEIIKR 321
P L + M+V+ GSK+ NL+ T + A+V+SG G A +KT++CAEI+KR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 322 QFSIQHQVTKLLYQIVEEHWEPKIEG----------LETLVVKRQIPAIHILLTSEPLKD 471
+ + HQVT+L Y+ V E W+ G +L V + +P + ILL+ + L D
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDAL-D 145
Query: 472 FNQLGCQSIN 501
Q G Q N
Sbjct: 146 PRQPGYQPPN 155
>BC002497-1|AAH02497.1| 199|Homo sapiens ribonuclease P 25kDa
subunit protein.
Length = 199
Score = 73.3 bits (172), Expect = 7e-13
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +1
Query: 142 PIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVWSGVGAAISKTISCAEIIKR 321
P L + M+V+ GSK+ NL+ T + A+V+SG G A +KT++CAEI+KR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 322 QFSIQHQVTKLLYQIVEEHWEPKIEG----------LETLVVKRQIPAIHILLTSEPLKD 471
+ + HQVT+L Y+ V E W+ G +L V + +P + ILL+ + L D
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDAL-D 145
Query: 472 FNQLGCQSIN 501
Q G Q N
Sbjct: 146 PRQPGYQPPN 155
>AY034074-1|AAK54443.1| 199|Homo sapiens RNase P protein subunit
p25 protein.
Length = 199
Score = 73.3 bits (172), Expect = 7e-13
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Frame = +1
Query: 142 PIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVWSGVGAAISKTISCAEIIKR 321
P L + M+V+ GSK+ NL+ T + A+V+SG G A +KT++CAEI+KR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 322 QFSIQHQVTKLLYQIVEEHWEPKIEG----------LETLVVKRQIPAIHILLTSEPLKD 471
+ + HQVT+L Y+ V E W+ G +L V + +P + ILL+ + L D
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDAL-D 145
Query: 472 FNQLGCQSIN 501
Q G Q N
Sbjct: 146 PRQPGYQPPN 155
>AK000381-1|BAA91128.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ20374 fis, clone HUV00348. ).
Length = 199
Score = 71.7 bits (168), Expect = 2e-12
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Frame = +1
Query: 142 PIEGLPDNFLWMQVRGGSKMSNLLNHVTGILEDKTATAVVWSGVGAAISKTISCAEIIKR 321
P L + M+V+ GSK+ NL+ T + A+V+SG G +KT++CAEI+KR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRVTTKTVTCAEILKR 86
Query: 322 QFSIQHQVTKLLYQIVEEHWEPKIEG----------LETLVVKRQIPAIHILLTSEPLKD 471
+ + HQVT+L Y+ V E W+ G +L V + +P + ILL+ + L D
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDAL-D 145
Query: 472 FNQLGCQSIN 501
Q G Q N
Sbjct: 146 PRQPGYQPPN 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,823,421
Number of Sequences: 237096
Number of extensions: 1600674
Number of successful extensions: 2753
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2751
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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