Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c15
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 48 6e-06
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 47 1e-05
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 43 2e-04
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 42 4e-04
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 41 9e-04
02_01_0735 + 5484398-5484400,5484670-5484773,5485012-5485138,548... 40 0.003
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 37 0.015
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 36 0.044
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 35 0.059
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951... 34 0.14
03_03_0016 - 13761007-13761489,13761929-13762096,13763086-137631... 33 0.18
01_06_1413 + 37149038-37149295,37149392-37149603,37149687-371499... 33 0.31
10_08_0662 + 19662748-19662826,19662868-19663136,19664360-196645... 31 0.72
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 31 0.95
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059 31 1.3
02_01_0413 - 3028946-3031111 31 1.3
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 31 1.3
01_01_1077 + 8485655-8486134,8486423-8486554,8487725-8487966,848... 30 1.7
10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800 29 5.1
10_08_0517 + 18482902-18482986,18483074-18483291,18483888-184840... 29 5.1
10_08_0005 + 14030414-14030519,14030612-14030921,14031012-140312... 29 5.1
01_05_0460 - 22442758-22442932,22443134-22443227,22443355-224435... 29 5.1
07_03_0796 + 21572131-21572204,21573427-21573482,21573580-215736... 28 6.7
05_05_0149 - 22733703-22736216 28 8.9
05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675... 28 8.9
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 658
+LY HGN+ + L + + LN +++ +DY GYG S+ KP+E+ D+ Y
Sbjct: 80 LLYSHGNAADLGQMYELFV-ELSSHLNVNLMGYDYSGYGQSSG-KPSEQNTYSDIEAAYR 137
Query: 659 WLLKTLDLEEEPTVFVWGHSLG 724
L++T EE + ++G S+G
Sbjct: 138 CLVETYGATEE-NIILYGQSVG 158
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 658
+LY HGN+ ++L ++ F L +V+ +DY GYG S+ KP+E D+ Y
Sbjct: 60 LLYSHGNAADLGHLYQLFLHLSFN-LRVNVLGYDYSGYGQSSG-KPSEHNTYADIEAAYK 117
Query: 659 WLLKTLDLEEEPTVFVWGHSLG 724
L++ +EE + ++G S+G
Sbjct: 118 CLIENFGAKEE-EIILYGQSVG 138
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 658
+LY HGN+ L + + L +++++DY GYG ST KP+E D+ VY
Sbjct: 74 LLYSHGNAADLGQMLGLFL-ELRAHLRVNIMSYDYSGYGASTG-KPSEYNTYCDIEAVYD 131
Query: 659 WLLKTLDLEEEPTVFVWGHSLG 724
L K +E E + ++G S+G
Sbjct: 132 CLTKVYGIEPEDLI-LYGQSVG 152
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = +2
Query: 449 HELKNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERG 628
H + +LY HGN+ + L + + + L ++ +DY GYG ST KPTE
Sbjct: 85 HVRHERASATLLYSHGNAADLGQMYGLFV-ELSRRLRINLFGYDYSGYGRSTG-KPTECN 142
Query: 629 VVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLG 724
D+ Y+ L + + +E + ++G S+G
Sbjct: 143 TYADIEAAYNCLKEKYGVADE-DIILYGQSVG 173
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 41.1 bits (92), Expect = 9e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +2
Query: 467 RNPV----ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVV 634
RNP +LY HGN+ + L + + L +++ +DY GYG ST KP+E
Sbjct: 68 RNPAARLTVLYSHGNAADLGQLYDLFV-QLKVNLKVNLMGYDYSGYGASTG-KPSEENTY 125
Query: 635 EDLFHVYSWLLKTLDLEEEPTVFVWGHSLG 724
D+ VY L + +E + ++G S+G
Sbjct: 126 ADIEAVYQCLETEYGISQEDLI-LYGQSVG 154
>02_01_0735 +
5484398-5484400,5484670-5484773,5485012-5485138,
5485212-5485306,5485597-5485720,5486523-5486603,
5487177-5487275,5487416-5487583,5487688-5487775,
5487860-5487930,5488000-5488068,5488368-5488499,
5488740-5488946
Length = 455
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 458 KNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGY----GDSTKVKPTER 625
+N+ P ++YCHGNS RA + + + N V T D+ G GD + E+
Sbjct: 22 ENTSLPCVIYCHGNSGCRADANEAAV--ILLPANITVFTLDFSGSGLSGGDYVSLGWHEK 79
Query: 626 GVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLG 724
EDL V S+L T ++ + +WG S+G
Sbjct: 80 ---EDLKCVVSYLRTT---KQVSCIGLWGRSMG 106
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/59 (40%), Positives = 29/59 (49%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
F + D RGYGDST P + +FH+ L+ LD P V V GH LG VA
Sbjct: 56 FRALAPDLRGYGDSTV--PDDPAAYT-VFHIVGDLVALLDHLALPKVMVVGHDLGAQVA 111
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 35.5 bits (78), Expect = 0.044
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
+ V D RGYG +T P E +FH+ L+ LD E P VFV GH G V+
Sbjct: 59 YRCVAPDLRGYGGTTA--PPEH-TSYTIFHLVGDLVALLDALELPQVFVVGHDWGAIVS 114
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 452 ELKNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKP 616
E +S NP +L+ HG + +A +R + V + N+H + FD+ G+G S K +P
Sbjct: 117 EAGSSSNPPVLFIHGFPS-QAYSYR-NVLPVVSD-NYHAIAFDWLGFGFSDKPQP 168
>06_03_0725 -
23894215-23894412,23894660-23894803,23895058-23895126,
23895197-23895267,23895357-23895444,23895522-23895707,
23895805-23895903,23896002-23896082,23896575-23896634,
23896656-23896779,23897026-23897120,23897205-23897331,
23897559-23897662,23897883-23897945
Length = 502
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 461 NSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYG-DSTKVKPTERGVVE 637
N+ P ++YCHGNS RA + + + N + T D+ G G + +
Sbjct: 43 NTALPCVIYCHGNSGCRADANEAAV--ILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQ 100
Query: 638 DLFHVYSWLLKTLDLEEEPTVFVWGHSLG 724
DL S+L +E + +WG S+G
Sbjct: 101 DLKCAVSFLRNN---KEVSCIGLWGRSMG 126
>03_03_0016 -
13761007-13761489,13761929-13762096,13763086-13763130,
13763380-13763447,13763532-13763586,13763659-13763814,
13763904-13764002,13764792-13764872,13765513-13765636,
13765938-13766032,13766434-13766560,13766768-13766871,
13767278-13767359,13768012-13768049
Length = 574
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 473 PVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPT-ERGVVEDLFH 649
P ++YCHGNS RA I + N V T D+ G G S T EDL
Sbjct: 66 PCVIYCHGNSGCRADASEAAI--ILLPSNITVFTLDFSGSGLSEGEHVTLGWNEREDLKA 123
Query: 650 VYSWLLKTLDLEEEPTVFVWGHSLG 724
V + L ++ + +WG S+G
Sbjct: 124 VVNHLRTDGNIS---CIGLWGRSMG 145
>01_06_1413 +
37149038-37149295,37149392-37149603,37149687-37149951,
37150099-37150407
Length = 347
Score = 32.7 bits (71), Expect = 0.31
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 658
I++ HG ++ + S + + +EL +++ FD GYGDS P +RG+ D V
Sbjct: 68 IIFSHGFASTKESDFPVS-QELAEELGIYLLYFDRAGYGDS-DANP-KRGLKSDATDVEE 124
Query: 659 WLLKTLDLEEEPTVFVWGHSLGXAVA 736
L L L E+ +V G S+G VA
Sbjct: 125 -LADKLQLGEK--FYVVGTSMGGYVA 147
>10_08_0662 +
19662748-19662826,19662868-19663136,19664360-19664571,
19665356-19665623,19665709-19666002
Length = 373
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDS 601
++Y HG S R R ++ +EL ++V FD GYG+S
Sbjct: 98 VVYSHGFSGGRMDSPRAS-QALLKELGVYMVAFDRAGYGES 137
>06_03_1313 -
29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 428 LKTNNTFHELKNSRNPVILYCHGNSNH--RASPHRLKIYS--VFQELNFHVVTFDYRGYG 595
L+ N+ H L SR V+ CH S+H + R +++S V ++N HV + +G+
Sbjct: 432 LQQQNSLHHLVMSRGNVLTQCHLGSDHAEKLLDKRNQLHSELVSSQINEHVGLTNLQGHY 491
Query: 596 DSTK 607
+ T+
Sbjct: 492 EQTQ 495
>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
F + D RGYGD+ E FHV L+ LD VFV GH G +A
Sbjct: 63 FRCLAPDLRGYGDTDAPPEIES---YSAFHVVGDLVALLDALGLAKVFVVGHDWGAIIA 118
>02_01_0413 - 3028946-3031111
Length = 721
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 440 NTFHELKNSRNPVILYCHGNSNHRASP 520
NT H LKN RN +L GN H A P
Sbjct: 416 NTLHILKNLRNLTVLLLGGNFMHEAMP 442
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
F V D RGYGDS + + V H+ L+ + P VFV GH G VA
Sbjct: 57 FRAVAPDLRGYGDSDAPQGRDSYTV---LHLVGDLVALIADLGRPQVFVAGHDWGAVVA 112
>01_01_1077 +
8485655-8486134,8486423-8486554,8487725-8487966,
8488254-8488500
Length = 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
F V D RGYGDS P R + H+ L+ + +P VFV H G AVA
Sbjct: 57 FRAVAPDLRGYGDSD--APPGRDSY-TVLHLVGDLVALIADVGQPRVFVAAHDWGAAVA 112
>10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800
Length = 332
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDS 601
I++ HG + R R V +EL ++V FD GYG+S
Sbjct: 61 IVFSHGFTGSRLDSLRASP-EVAEELGVYMVAFDRAGYGES 100
>10_08_0517 +
18482902-18482986,18483074-18483291,18483888-18484049,
18484132-18484367,18484455-18484710
Length = 318
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 560 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLG 724
+ V D+RGYG S + E V +DL LL LD P F+ G G
Sbjct: 59 YRAVAPDWRGYGLSDQPPEPEAAVYDDLIED---LLAILDALAVPKAFLVGKDFG 110
>10_08_0005 +
14030414-14030519,14030612-14030921,14031012-14031233,
14031326-14031565,14031727-14031804,14031841-14032036,
14032084-14032265,14032351-14032433,14032526-14032650,
14032762-14032840,14032924-14033092,14033171-14033231,
14033312-14033434,14033552-14033749,14033927-14033995,
14034244-14034320,14034475-14034562
Length = 801
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 398 PNSEIKDVADLKTNNTFHELKNSRN-PVILYCHGNSNHRASPHRLKIYSVFQELNFHVVT 574
P+ ++ D + L F K+S + P IL HG + + K + L F+++
Sbjct: 534 PSDDLSDGSKLPFEAIFVSCKDSSHKPTILVLHGGPHSVSVSSYSKTSAFLASLGFNLLI 593
Query: 575 FDYRG 589
+YRG
Sbjct: 594 VNYRG 598
>01_05_0460 -
22442758-22442932,22443134-22443227,22443355-22443519,
22444013-22444134,22445024-22445106,22445251-22445372,
22445668-22445695
Length = 262
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 476 VILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTK--VKPTERGVVEDLFH 649
+++ CHG + + L + + + V FD+ G G+S R +DL
Sbjct: 39 IVVLCHGFISTKNDSLILDLMAALTKKGISVFRFDFSGNGESEGEFEYGNYRKEADDLHS 98
Query: 650 VYSWLLKTLDLEEEPTVFVWGHSLGXAV 733
V S+L K E+ + GHS G V
Sbjct: 99 VVSYLCK----EKYDVTAIVGHSKGGDV 122
>07_03_0796 +
21572131-21572204,21573427-21573482,21573580-21573671,
21574103-21574205,21574297-21574434,21574654-21574907
Length = 238
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 323 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKTNNTFHELK 460
G L+ FR +VDNFL +G W + + + D++ T H+LK
Sbjct: 198 GLKLSPWFRLVVDNFL--MGWWDHVEKGTLNEAVDME---TIHKLK 238
>05_05_0149 - 22733703-22736216
Length = 837
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 414 LISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQLDG 298
L + F S+C I + K++T++++ + F P +L G
Sbjct: 699 LENRFSSLCGIQEEISKIATLDKSDEVHFTPFQAAKLQG 737
>05_04_0307 +
20066169-20066410,20066803-20066858,20067490-20067581,
20068400-20068502,20068623-20068760,20068898-20069148
Length = 293
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 323 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKT 436
G L+ FR +VDNFL+R W + +++ D+KT
Sbjct: 254 GIKLSPWFRLVVDNFLMRW--WDHVEQGTLEEAIDMKT 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,429,771
Number of Sequences: 37544
Number of extensions: 362734
Number of successful extensions: 1018
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -