Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c15
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 117 1e-26
Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical p... 42 6e-04
Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical ... 31 0.85
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical ... 28 6.0
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 117 bits (281), Expect = 1e-26
Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 5/185 (2%)
Frame = +2
Query: 197 VAVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSV-TCGRNLNIEFRSIVDNFLI 373
V LP++ + + + F N P N +Y+ +S +V + GR+L++ +S
Sbjct: 24 VIFLPILVYFLPRYTQFIFFLNFRRLP-NTDYNDLASNNVKSIGRSLHLPGKSG------ 76
Query: 374 RLGIWHILPNS---EIKDVADLKTNNTFHEL-KNSRNPVILYCHGNSNHRASPHRLKIYS 541
R+G+WHILPN E + T F ++ ++S N +I Y HGNS R HR+++Y+
Sbjct: 77 RIGVWHILPNKLSLEWRTEGKHPTERDFDDMMRDSENQIIFYAHGNSFDRTFYHRVEMYN 136
Query: 542 VFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSL 721
+ + N+HVV FDYRGYGDS + PTE+G+VED VY WL + + V VWGHS+
Sbjct: 137 LLSDCNYHVVCFDYRGYGDS-EGTPTEKGIVEDTKTVYEWLKENCG---KTPVIVWGHSM 192
Query: 722 GXAVA 736
G V+
Sbjct: 193 GTGVS 197
>Z75712-10|CAB00039.2| 332|Caenorhabditis elegans Hypothetical
protein K04G2.2 protein.
Length = 332
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 479 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 658
+L+ HGN+ +Y + LN +V ++DY GYG ST KP+E+ + D+ +
Sbjct: 115 LLFSHGNAVDLGQMTSF-LYGLGFHLNCNVFSYDYSGYGCSTG-KPSEKNLYADITAAFE 172
Query: 659 WLLKTLDLEEEPTVFVWGHSLG 724
L + +E + ++G S+G
Sbjct: 173 LLKSEFGVPKE-KIILYGQSIG 193
>Z81493-7|CAE46664.1| 342|Caenorhabditis elegans Hypothetical
protein F01D5.7b protein.
Length = 342
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +2
Query: 440 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 607
N + + N V+L+C +S S P+ + +S F L V FDY GYG S+
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168
Query: 608 VKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
+ +E+ + D+ VY +LKT + + V G+S+G A
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT---RPDKKIVVIGYSIGTTAA 207
>Z81493-6|CAB04038.1| 335|Caenorhabditis elegans Hypothetical
protein F01D5.7a protein.
Length = 335
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +2
Query: 440 NTFHELKNSRNPVILYCHGNSNHRAS---PHRLKIYSVFQEL-NFHVVTFDYRGYGDSTK 607
N + + N V+L+C +S S P+ + +S F L V FDY GYG S+
Sbjct: 110 NCYSKNPEVANQVVLFCQSSSADLGSFLQPNSMN-FSTFANLFETDVYAFDYSGYGFSSG 168
Query: 608 VKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGHSLGXAVA 736
+ +E+ + D+ VY +LKT + + V G+S+G A
Sbjct: 169 TQ-SEKNMYADVRAVYEHILKT---RPDKKIVVIGYSIGTTAA 207
>AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical
protein Y71H2AM.13 protein.
Length = 550
Score = 31.1 bits (67), Expect = 0.85
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Frame = +2
Query: 389 HILPNSEIKDVADLKTNNTFHELKNSRN----PVILYCHGNSNHRASPHRLKIYSVFQEL 556
H+L D T N F + +N PVILY HG S H+ S+ Q L
Sbjct: 84 HVLSPKTSPQSEDNLTLNIFTPVWTPKNETGFPVILYIHGGGFVSDSAHKYGDMSICQHL 143
Query: 557 ---NFHVVTFDYR----GYGDSTKVKPTERGVVEDLFHVYSWLLKTLDL-EEEP-TVFVW 709
+ VVT YR G+ + + + D+ W+ + + L +P + +
Sbjct: 144 VTKDVVVVTIQYRLGFLGFWTTGDSSIPDNVALHDMVFALKWVKENIGLFNGDPNNITLM 203
Query: 710 GHSLGXA 730
G S G A
Sbjct: 204 GQSAGGA 210
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 213 RGSTATWNTRTPAVSEAPVAKRSPKTMLRRKYST 112
RGSTA TR P + AP A R+P R +T
Sbjct: 298 RGSTAAPGTRAPPATRAPPATRAPPATTRAPPAT 331
>Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical
protein R74.8b protein.
Length = 448
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 212 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 337
LM R K ++V + + +P + YD S + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 212 LMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLN 337
LM R K ++V + + +P + YD S + C RNLN
Sbjct: 186 LMVRKKKFPVDELVNNEKLGYPLGVTYDEKSKYWIICDRNLN 227
>AC024817-2|AAU87810.1| 520|Caenorhabditis elegans Hypothetical
protein Y54G2A.38 protein.
Length = 520
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 417 SLISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQ 307
S++ F SI Q+ + + LSTIERN + L +Q
Sbjct: 195 SIVCNFLSIMQLKLMKKNLSTIERNLLFSTLASSVIQ 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,802,864
Number of Sequences: 27780
Number of extensions: 319494
Number of successful extensions: 1093
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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