Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c13
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.8  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 635 KINSNNVTAIAKEVLEGKKTKRVTIDE 715
           K+N+NNV +   + + G K K   ++E
Sbjct: 87  KLNNNNVVSSTNQEIRGPKRKTWKVEE 113


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 49  IYHLRVHAVSCF 14
           I+HL  HAV+CF
Sbjct: 366 IHHLARHAVACF 377


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 490 FRSLDFSSFWYNFFAAFVRGWF 425
           ++S  F    YN F AFV G F
Sbjct: 63  WKSFRFVYAVYNIFGAFVMGLF 84


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 44  INTIKKI*EQHNHNMKIIRV 103
           +NT+ KI   H+H  K++++
Sbjct: 499 LNTLNKICALHHHLSKLVKL 518


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 44  INTIKKI*EQHNHNMKIIRV 103
           +NT+ KI   H+H  K++++
Sbjct: 224 LNTLNKICALHHHLSKLVKL 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,704
Number of Sequences: 336
Number of extensions: 2678
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)