BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c13
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69981-1|CAA93821.1| 327|Anopheles gambiae maltase precursor pr... 25 1.8
DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein. 24 5.6
AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein. 24 5.6
AY341213-1|AAR13777.1| 260|Anopheles gambiae SRPN9 protein. 24 5.6
AY341212-1|AAR13776.1| 260|Anopheles gambiae SRPN9 protein. 24 5.6
AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein. 24 5.6
AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein. 24 5.6
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 7.4
>Z69981-1|CAA93821.1| 327|Anopheles gambiae maltase precursor
protein.
Length = 327
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 206 VKDKTLNDSALNVLPETKKKGIYVEKRNFAQKTQV 310
VK L DS L V+ E G Y+ NF + +V
Sbjct: 221 VKAVALGDSVLAVVRELTNFGTYITLANFGSQIEV 255
>DQ974168-1|ABJ52808.1| 447|Anopheles gambiae serpin 9 protein.
Length = 447
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 293 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 331
>AY341214-1|AAR13778.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 167 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 205
>AY341213-1|AAR13777.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 167 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 205
>AY341212-1|AAR13776.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 167 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 205
>AY341211-1|AAR13775.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 167 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 205
>AY341210-1|AAR13774.1| 260|Anopheles gambiae SRPN9 protein.
Length = 260
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 711 SMVTLFVFFPSKTSLAIAVTLLELILQTSRL*SEYNDGL 595
+ V++FVF P A++ L L +T L N+G+
Sbjct: 167 NQVSMFVFLPPAEPNALSKLLSRLAAETDILHEVVNEGI 205
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 232 AIIKRFIFNNFSFNCVRRRLRLQNSPVRLLHFL 134
A+ R FN S+ C+ LR + P++L + L
Sbjct: 572 ALDVRNAFNTASWQCIAEALRDKGVPLQLCNIL 604
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,508
Number of Sequences: 2352
Number of extensions: 11975
Number of successful extensions: 70
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -