Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c12
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0709 + 24480660-24481796 32 0.56
06_01_1181 + 10148653-10149405 31 0.74
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 31 0.98
06_01_0159 + 1193479-1194435,1194509-1194652,1194735-1194821,119... 30 1.7
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118... 30 1.7
01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-70... 30 1.7
03_05_0095 - 20745639-20745785,20745880-20746065,20746286-207463... 30 2.3
12_01_0452 - 3566352-3567602,3568840-3569389,3570169-3570203 29 3.0
03_06_0287 - 32859893-32859905,32860405-32860820 29 3.0
02_01_0340 + 2415272-2415486,2415883-2416308,2416313-2417243 29 3.0
01_01_1231 + 9961783-9961817,9962612-9963161,9964441-9965691 29 3.0
09_06_0281 + 22014394-22015534,22016041-22017056 29 4.0
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 5.2
05_05_0175 + 22966151-22967614 29 5.2
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 29 5.2
02_01_0153 - 1073790-1074026,1074110-1074595,1074686-1075213,107... 29 5.2
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 28 6.9
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 28 6.9
03_04_0069 - 17022468-17023361 28 6.9
01_01_0523 + 3837452-3837512,3837923-3838060,3838196-3838236,383... 28 6.9
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 28 9.2
03_02_0753 - 10928744-10929139,10929291-10929509 28 9.2
02_04_0313 - 21947115-21948021,21948102-21948172 28 9.2
>01_05_0709 + 24480660-24481796
Length = 378
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 487 YHCLIHSSLRKAMMMYGNDVFFGSVSVQSLGDFSFILSIIFGLRQRG-ARGARDVAIAHR 311
Y C++ + + +DVF+ +V + L D ++ GL++ G R AR V I R
Sbjct: 273 YTCVVAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAGKGRAARRVVIGLR 332
Query: 310 SFF 302
F
Sbjct: 333 KKF 335
>06_01_1181 + 10148653-10149405
Length = 250
Score = 31.5 bits (68), Expect = 0.74
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 36 PPPPRCVELVPDDACRIRNSDHLNPCAHRRPTLVEIDRSHQSASEEKPRKHPSPVREFTA 215
PPPP E +P A +R D L P A+ + + H S++ V EF +
Sbjct: 13 PPPPMAAEQLPPAAAVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFIS 72
Query: 216 RILKSLN 236
+ N
Sbjct: 73 FVTGEAN 79
>08_02_0678 -
19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 31.1 bits (67), Expect = 0.98
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 493 PDKSQLNEAGLGRIVSRMDQK--RNALSTHSAGSIELHVPPGAERVRVDVTITSSSNDIT 666
PDK ++ L I+ + + + + TH ++ + RV DV T SSND
Sbjct: 500 PDKLTPDQKELEAIMQQAQNQFLNSFMQTHKGTVVQKY----QVRVVADVPGTGSSNDGR 555
Query: 667 LLPPLDSSDQPSRR 708
L LDSS QPS R
Sbjct: 556 LKEALDSSAQPSDR 569
>06_01_0159 + 1193479-1194435,1194509-1194652,1194735-1194821,
1194910-1195244,1195600-1195840,1195921-1195995,
1196072-1196157,1196591-1196663,1196805-1197535,
1197613-1197784,1197862-1197948,1198255-1198344,
1198439-1198549
Length = 1062
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E+D + PR+ +P I+ + K+ +R + + ++ L++ Q RC
Sbjct: 820 EVDEGEKGVPSSPPRREQNPSHALDKDIVYYSRKKKEKKRKEKS-RSSLDNDLIQLGKRC 878
Query: 318 AIATSRAPL 344
IAT+R +
Sbjct: 879 RIATTRTAI 887
>06_01_0158 -
1186903-1187013,1187108-1187197,1187504-1187590,
1187668-1187839,1187917-1188647,1188789-1188861,
1189295-1189380,1189455-1189529,1189610-1189643,
1190331-1190622,1191073-1191439
Length = 705
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E+D + PR+ +P I+ + K+ +R + + ++ L++ Q RC
Sbjct: 463 EVDEGEKGVPSSPPRREQNPSHALDKDIVYYSRKKKEKKRKEKS-RSSLDNDLIQLGKRC 521
Query: 318 AIATSRAPL 344
IAT+R +
Sbjct: 522 RIATTRTAI 530
>01_01_0089 - 699533-699643,699738-700046,700134-700220,700298-700469,
700547-701373,701487-701559,701993-702078,702153-702227,
702308-702548,702905-703239,703328-703414,703497-703640,
703714-704670
Length = 1167
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E+D + PR+ +P I+ + K+ +R + + ++ L++ Q RC
Sbjct: 832 EVDEGEKGVPSSPPRREQNPSHALDKDIVYYSRKKKEKKRKEKS-RSSLDNDLIQLGKRC 890
Query: 318 AIATSRAPL 344
IAT+R +
Sbjct: 891 RIATTRTAI 899
>03_05_0095 -
20745639-20745785,20745880-20746065,20746286-20746348,
20747255-20747331,20748692-20749121
Length = 300
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 297 PQKKDRCAIAT--SRAPLAPRCRKPN-IMDKIKEKSPRDCTDT 416
P + RC ++T SR P PRC+ P+ ++ R C DT
Sbjct: 71 PSGQGRCRLSTVMSRVPPPPRCQTPSRTLESFGRHQIRSCLDT 113
>12_01_0452 - 3566352-3567602,3568840-3569389,3570169-3570203
Length = 611
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 583 GSIELHVPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPSTRL 750
G +L VPP A + +D+T SS++ T + + S+ + E+ +KK+ ST L
Sbjct: 93 GFSDLEVPPEAHKKDLDLTSDESSDEDT-IDAIGLSEVEADAKPEEPIKKSQSTLL 147
>03_06_0287 - 32859893-32859905,32860405-32860820
Length = 142
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +3
Query: 12 AYCGPNRQPPPPRCVELVPDDACRIRNSDHLNPCAHRRPTLVEIDRSHQSASEEKP---R 182
+YCGP P C +P C ++ D AH+ D +A+E+KP +
Sbjct: 8 SYCGP------PLCY--IP---CLPKSKDAAGDAAHKSKDAAAADAVPVAAAEDKPPPVQ 56
Query: 183 KHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKP 299
K + V E K ++ D++ DD+ KT + P
Sbjct: 57 KIEAAVAEKDGDDSKEVDGDEEEEEDDDDVKTAVAVAAP 95
>02_01_0340 + 2415272-2415486,2415883-2416308,2416313-2417243
Length = 523
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Frame = +3
Query: 39 PPPRCVELVPDDACRIRNSDHLNP-CAHRRP---TLVEIDRSH----QSASEEKPRKHP- 191
PPPRC VP A S +P CA VE DRSH S++ E+P + P
Sbjct: 10 PPPRCTTFVPYGASGSGTSKTPHPGCAAGGGCGCATVEADRSHAPSTPSSAAERPNQRPC 69
Query: 192 -SPVREFTARILKSLNRD 242
+RE L L+ D
Sbjct: 70 SGTLREIGPCDLSKLSPD 87
>01_01_1231 + 9961783-9961817,9962612-9963161,9964441-9965691
Length = 611
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 583 GSIELHVPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPSTRL 750
G +L VPP A++ +D+T SS++ T + + S + E+ +KK+ ST L
Sbjct: 93 GFSDLEVPPEADKKDLDLTSDESSDEDT-IDAIGLSQVEADAKPEEPIKKSQSTLL 147
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +1
Query: 409 QTPIQKKRHFHTSSLLSLMKNESNNGKFPDKSQLNEAG-----LGRIVSRMDQKRNALST 573
+TPI R + LSL +N+ GK P ++ E G G +++ AL T
Sbjct: 197 ETPIAIGRPSYLVQFLSLDQNQELTGKLPVAVRIAERGWFEGVAGELLNTSSDSAAALRT 256
Query: 574 HSAGSIELHVPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTN 714
+E V P E V VT ++D P D++ R +N
Sbjct: 257 PVPVVLEWVVSPTLEAVLQGVT-GQFADDRNWSCPADAARSACRSSN 302
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +3
Query: 144 DRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRCAI 323
D +S E+ P+K + R+ +LK+ + DK A K + K K +
Sbjct: 87 DDEDESDEEDTPKKPETGKRKVAEIVLKTPSSDKKA------KIATPSGQKTGDKKGVHV 140
Query: 324 ATSRAPLAPRCRKPNIMDKIKEKSPR 401
AT A + K + DK KEKSP+
Sbjct: 141 ATPHP--AKQASKTPVNDKSKEKSPK 164
>05_05_0175 + 22966151-22967614
Length = 487
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = +3
Query: 216 RILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRCAIATSRAPLAPRCRKPNIMDKIKEKS 395
R L + N D KKT + K+D A A++R A R+ + ++ K+
Sbjct: 223 RFLPAANAIATTSADKRPKKTPRRGARSSKQDEEATASARR-RAQSLRRASGREQPKQPP 281
Query: 396 PRDCTDTDPKKTSFP 440
PR T +K S P
Sbjct: 282 PRHHVSTLQRKESEP 296
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 159 SASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRCAIA-TSR 335
S + +K SPV + +L S N D D T+ ++ K QKK+ A + T+
Sbjct: 390 STASSPGKKSNSPVVKLMKGLLNSFNSDCDKSNTLITELVNIKKLKEQKKEEIAESLTNC 449
Query: 336 APLAPRC 356
LA C
Sbjct: 450 QRLAVEC 456
>02_01_0153 -
1073790-1074026,1074110-1074595,1074686-1075213,
1075421-1075513,1075620-1075671,1075800-1075904,
1076020-1076180
Length = 553
Score = 28.7 bits (61), Expect = 5.2
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Frame = +1
Query: 421 QKKRHFHTSSLLSLMKNESNNGKFPDKSQLNEA-----GLGRIVSRM-DQKRNALSTHSA 582
+KK + H L SL+ N + K S L +A GL + V + D+ + H
Sbjct: 294 RKKLNGHLYKLRSLVPNIT---KMDRASILGDAIDYIVGLQKQVKELQDELEDNHVHHKP 350
Query: 583 GSIELHVPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNE 717
+ + PP A V +D S N PPL S SRR+N+
Sbjct: 351 PDVLIDHPPPASLVGLDNDDASPPNSHQQQPPLAVSGSSSRRSNK 395
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 589 IELHVPPGAERVRVDVTITSSSNDITLLPPLDSSDQPSRRTNEKHVKKAPST 744
++ VPP E ++ ++ TSSS P S++Q S E VKKA +T
Sbjct: 137 VKFCVPPPNEHMQQSISTTSSSAQSNPRPKKSSTNQQSA---ESSVKKASAT 185
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 28.3 bits (60), Expect = 6.9
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = -2
Query: 436 NDVFFGSVSVQSLGDFSFILSIIFGLRQRGARGARDVAIAHRSFFWGLQEFKSVFFVLSS 257
+D F ++ + S+ S ++++ GLR +GA R VA A+ +Q V+
Sbjct: 305 DDSMFLALLISSMSPTSKVIAMYPGLRDKGAAYLRSVADANNFSIDQIQ-------VIGK 357
Query: 256 RRASLSRFKLFNIRAVNSRTGDGCFLGFSSEADW 155
R +S++ L + + VN G+ +LG W
Sbjct: 358 RASSITADDLKH-KKVNLLVGEPFYLGSEGMLPW 390
>03_04_0069 - 17022468-17023361
Length = 297
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = -3
Query: 201 EPEMDAFLVF---PQKQIGDCGRFLLVWAVGVRKGSNGQNFGSCRRRPARVQRIGAVGAD 31
+PE+DA+LV P+++ G C V G G G R ARV+R+G A
Sbjct: 215 DPEVDAWLVVGEAPRRRYG-CAGASAGGVFYVAGGRRGVRRGRAGARGARVRRVGGRAAR 273
Query: 30 GLGH 19
+ H
Sbjct: 274 RVRH 277
>01_01_0523 +
3837452-3837512,3837923-3838060,3838196-3838236,
3839095-3839172,3842040-3842115,3842921-3843081,
3843221-3843320,3843416-3843482,3843974-3844088,
3844156-3844221
Length = 300
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 135 VEIDRSHQSASEEKPRKHPSPVREF 209
V +DRSH+ A E +PR S +++F
Sbjct: 112 VGVDRSHERAREIEPRAESSSIQQF 136
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 212 CEFSNRRWMLSWFFLRSRLVTAVDFY*CGPSV 117
C+ SN+ W +WF++++ L A+ Y C P V
Sbjct: 154 CKTSNKGWHANWFYVQN-LEPALPEYSCLPPV 184
>03_02_0753 - 10928744-10929139,10929291-10929509
Length = 204
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 698 GWSEESNGG-RSVMSLEEEVIVTSTRTLSAPGGT 600
GW S G R ++ ++EE +V T LS+ GG+
Sbjct: 123 GWDSASGPGERELVHVQEENLVAGTLVLSSSGGS 156
>02_04_0313 - 21947115-21948021,21948102-21948172
Length = 325
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 135 VEIDRSHQSASEEKPRKHPSPVREFTARILKSL-NRDKDARRDD 263
V+IDR Q +S E PR+ P P + R + S+ +R A +D
Sbjct: 217 VQIDRRDQPSSPEPPRRSPDPRSAQSFRRVASMGSRSPPAPSED 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,433,799
Number of Sequences: 37544
Number of extensions: 562872
Number of successful extensions: 1985
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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