Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c12
(752 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 27 0.19
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 27 0.19
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.25
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 1.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 1.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 1.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 7.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 7.1
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 27.1 bits (57), Expect = 0.19
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 444 CMEMTFFLDRCLYSLWGIFLLFCPLYLVCGSA-GPGGLVT 328
CM ++ C Y W + LFC +Y + GS G G + T
Sbjct: 104 CMSPPMVIN-CYYETWVLGPLFCQIYAMLGSLFGCGSIWT 142
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 27.1 bits (57), Expect = 0.19
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 444 CMEMTFFLDRCLYSLWGIFLLFCPLYLVCGSA-GPGGLVT 328
CM ++ C Y W + LFC +Y + GS G G + T
Sbjct: 70 CMSPPMVIN-CYYETWVLGPLFCQIYAMLGSLFGCGSIWT 108
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.6 bits (56), Expect = 0.25
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 3 EQTAYCGPNRQ-PPPPR 50
E+ +C PNR+ PPPPR
Sbjct: 1690 EELNHCAPNRRCPPPPR 1706
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E DR ++ EK + R R +S R+K + +++N+ + + K + +DR
Sbjct: 14 EKDRRYEKLHNEKEKLLEE--RTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
Query: 318 AIATSRAP 341
S+ P
Sbjct: 72 ERERSKEP 79
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E DR ++ EK + R R +S R+K + +++N+ + + K + +DR
Sbjct: 14 EKDRRYEKLHNEKEKLLEE--RTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
Query: 318 AIATSRAP 341
S+ P
Sbjct: 72 ERERSKEP 79
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E DR ++ EK + R R +S R+K + +++N+ + + K + +DR
Sbjct: 14 EKDRRYEKLHNEKEKLLEE--RTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
Query: 318 AIATSRAP 341
S+ P
Sbjct: 72 ERERSKEP 79
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E DR ++ EK + R R +S R+K + +++N+ + + K + +DR
Sbjct: 14 EKDRRYEKLHNEKEKLLEE--RTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 71
Query: 318 AIATSRAP 341
S+ P
Sbjct: 72 ERERSKEP 79
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 138 EIDRSHQSASEEKPRKHPSPVREFTARILKSLNRDKDARRDDNTKKTDLNSCKPQKKDRC 317
E DR ++ EK + R R +S R+K + +++N+ + + K + +DR
Sbjct: 247 EKDRRYEKLHNEKEKLLEE--RTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRK 304
Query: 318 AIATSRAP 341
S+ P
Sbjct: 305 ERERSKEP 312
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 692 SEESNGGRSVMSLEEEVIVTS-TRTLSAPGGTCNSM 588
SEE N ++ E+ V+VT+ T T++ P + SM
Sbjct: 814 SEEKNINDHCVTTEQSVVVTNVTTTINTPTTSVISM 849
Score = 22.2 bits (45), Expect = 5.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 282 LNSCKPQKKDRCAIATSRAPLAPRCRKPNIMDKIKEKSPRDCTDTDPKK 428
L KK+ +++ ++A L P + N+ KE+SP +T PKK
Sbjct: 749 LQGVAKNKKNVGSMSRNKA-LLPVIKPANVN---KEQSPNSTKETTPKK 793
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 689 EESNGGRSVMSLEEEVIVTSTRTLSAPGGTCNSMLPA 579
EES+GG + + ++ + S PGG +S P+
Sbjct: 58 EESSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPS 94
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 168 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 199
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 267
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 EKRTLYSQCRQHRVACPTWSRKSPRRRNYYFF 650
+K T+ QC T++ + RR YYFF
Sbjct: 236 KKNTITYQCCPEPYVDVTFTIQIRRRTLYYFF 267
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.8 bits (44), Expect = 7.1
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = -1
Query: 743 VLGAFLTCFSL 711
++GAF+TCF++
Sbjct: 316 MIGAFITCFTM 326
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 7.1
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 508 TVTCREIYHCLIHSSLRKAMMMYGNDVFFGSVSVQSLGDF 389
TVTC+E H L ++ + ++ N G +S+ L +
Sbjct: 387 TVTCQEAMHMLKNADSQLLVISDDNIHIKGVISLNKLTSY 426
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,204
Number of Sequences: 438
Number of extensions: 5469
Number of successful extensions: 31
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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