Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c10
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6NS55 Cluster: Pitpnm2 protein; n=7; Eutheria|Rep: Pit...    35   1.6  
UniRef50_Q486R3 Cluster: Sensor protein; n=1; Colwellia psychrer...    34   2.8  
UniRef50_Q8IMR1 Cluster: CG31072-PB, isoform B; n=3; Sophophora|...    33   4.9  
UniRef50_UPI00015A6CA9 Cluster: ADAMTS-1 precursor (EC 3.4.24.-)...    33   6.5  
UniRef50_Q22DN5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_A0BYR3 Cluster: Chromosome undetermined scaffold_137, w...    33   8.6  

>UniRef50_Q6NS55 Cluster: Pitpnm2 protein; n=7; Eutheria|Rep:
           Pitpnm2 protein - Mus musculus (Mouse)
          Length = 1098

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +2

Query: 329 PSISSESAAEVNSLVAAVEEGAKEEFFDAHESYHVIPDNQIEN 457
           PS  S S   + S+    +EG++EEFFDAHE+ +   + Q ++
Sbjct: 317 PSRHSISEWRMQSIARDSDEGSEEEFFDAHENLYCTEEKQAKD 359


>UniRef50_Q486R3 Cluster: Sensor protein; n=1; Colwellia
           psychrerythraea 34H|Rep: Sensor protein - Colwellia
           psychrerythraea (strain 34H / ATCC BAA-681)
           (Vibriopsychroerythus)
          Length = 434

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 212 SQEVFGCRIPQ-YLKKTKTYLRYPLDREYLQHQNFDFPCYLL 90
           +Q + G R P  + ++    LR P   +YL H+NF++PC L+
Sbjct: 127 AQRLLGVRWPDDFGQRIDNLLRAPEFSDYLAHENFEYPCLLV 168


>UniRef50_Q8IMR1 Cluster: CG31072-PB, isoform B; n=3;
           Sophophora|Rep: CG31072-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 887

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 420 SCASKNSSLAPSSTAATRELTSAALSEEILGSILSVT-CLT 301
           S  S +SS + SST+ T   T+ A    ILG+ILSVT C+T
Sbjct: 791 SNGSTSSSTSSSSTSTTTSTTTQASPAAILGAILSVTFCVT 831


>UniRef50_UPI00015A6CA9 Cluster: ADAMTS-1 precursor (EC 3.4.24.-) (A
           disintegrin and metalloproteinase with thrombospondin
           motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1).; n=1; Danio
           rerio|Rep: ADAMTS-1 precursor (EC 3.4.24.-) (A
           disintegrin and metalloproteinase with thrombospondin
           motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). - Danio rerio
          Length = 886

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 495 SINKDQKQLHNRPQVPNHLPQTLPNRIKSLRLFQNQ*RVTIEEKS 629
           S+N D + L ++PQ P  LPQTLP  +        Q R+T  E+S
Sbjct: 367 SVNGDHQCLLDKPQKPEELPQTLPGSVYDA---DRQCRLTFGEES 408


>UniRef50_Q22DN5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 795

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 20/90 (22%), Positives = 45/90 (50%)
 Frame = +3

Query: 354 QKSILSLQQLRKALKRNSSMHTRAIMLFQTIKSKIQKLK*FWXXXXXSINKDQKQLHNRP 533
           Q  ++S QQ  + L+    +HT+   + Q + +++QK    +      + KD+++ +++ 
Sbjct: 457 QSELISSQQSLQKLQEQFDIHTKQTNIVQQLNNQLQKEIASFKDSVQQLEKDKQEAYDKI 516

Query: 534 QVPNHLPQTLPNRIKSLRLFQNQ*RVTIEE 623
           Q    +   L N I  L+   ++  +TI+E
Sbjct: 517 QQKESIIVDLENSILKLKDQIHKNLLTIDE 546


>UniRef50_A0BYR3 Cluster: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 4112

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 24/73 (32%), Positives = 38/73 (52%)
 Frame = -2

Query: 266 QVNYFPQ*DRLS*LHEYPSQEVFGCRIPQYLKKTKTYLRYPLDREYLQHQNFDFPCYLLP 87
           Q+  F +    S ++ YP++   G ++ QYLK  KT  R  ++R   Q+QN +    L P
Sbjct: 706 QIKIFKREHENSVVNIYPAENSNG-QVSQYLKDLKT--RQTVNRVAQQNQNLEENQNLKP 762

Query: 86  VSTMKCCVKLLFV 48
           V     C++L FV
Sbjct: 763 VYFSVDCLRLAFV 775


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,363,220
Number of Sequences: 1657284
Number of extensions: 8859532
Number of successful extensions: 23362
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23361
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)