Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c10
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.0  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 592 NNRRLFIRFGKVC 554
           +NRR+FI F K+C
Sbjct: 215 SNRRVFISFSKIC 227


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 592 NNRRLFIRFGKVC 554
           +NRR+FI F K+C
Sbjct: 233 SNRRVFISFSKIC 245


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 72  MLCKTFVCLLNGFDF 28
           ML KT +C+ N FDF
Sbjct: 95  MLDKTGICVSNVFDF 109


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 433 NMIALVCIEEFLFSAFLNCC 374
           +++ LVCI  F +   L CC
Sbjct: 251 HLLLLVCIYYFYYMHLLFCC 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,774
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)