Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c09
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.090
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.090
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.090
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.090
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    27   0.21 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.21 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.21 
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    25   0.48 
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    25   0.48 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.84 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW +W+L   WI
Sbjct: 212 FLSHQHAWIWLVWLLSQAWI 231


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW +W+L   WI
Sbjct: 445 FLSHQHAWIWLVWLLSQAWI 464


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 731 FCSHQCGGIWQLWILF*PWI 672
           F SHQ   IW +W+L   WI
Sbjct: 445 FLSHQHAWIWLVWLLSQAWI 464


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 182 LCSLGPFLQRLSL*DELLYRD 120
           L SLG FL R+ L  +LLY+D
Sbjct: 74  LMSLGMFLSRVPLGGKLLYKD 94


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 182 LCSLGPFLQRLSL*DELLYRD 120
           L SLG FL R+ L  +LLY+D
Sbjct: 74  LMSLGMFLSRVPLGGKLLYKD 94


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = +2

Query: 176 YKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDV 298
           Y + L +   +++I+ F  +   LN+ LET+  Q++++ ++
Sbjct: 180 YYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSVEEL 220


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 89  FKQKPHFCKVINYSCIM 39
           FK+KP  C V   SC +
Sbjct: 220 FKKKPLLCVVSTLSCYL 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,087
Number of Sequences: 336
Number of extensions: 3684
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)