Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c08
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical pr...    31   0.75 
Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical...    27   9.2  

>Z71262-5|CAA95818.1|  606|Caenorhabditis elegans Hypothetical
           protein F22D6.6 protein.
          Length = 606

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
 Frame = +2

Query: 362 PSIELSISGNTDINPNYFCAKSILFSGLNCNTAI------NQIRETDPVLYIIEEDDALC 523
           P+I L++ G    +P  + A+ I+ +G N N  +       Q++E DPV ++I  +D L 
Sbjct: 348 PAIMLAVEGRCTKSPFEWYARPIVKTGRNANGEMVIWNDEEQLKEVDPVDWMIYGNDQLL 407

Query: 524 CL*DPINT 547
            + + ++T
Sbjct: 408 SMAEQLDT 415


>Z66523-7|CAA91416.2|  409|Caenorhabditis elegans Hypothetical
           protein M05D6.7 protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = +1

Query: 43  TWTKNWEREKVLAK-------YHNEMLHSKMISNQRGCMAQHCDN*KCHHLHSV*TKSNV 201
           TW   W  + + +K       Y NE   SK+I      +  HC + K +HL +   KSN 
Sbjct: 12  TWVTGWNLKNIRSKNDCLEIRYENEGNPSKLIM-PFVWLRDHCTSQKLYHLPTNQRKSNC 70

Query: 202 CQV 210
           C +
Sbjct: 71  CDI 73


>Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical
           protein C50B6.6 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 105 MQHFVMIFRQNFLSFPVFCPSLKCACHSKQSH 10
           + + VM F    +  PVFC +    CH KQ H
Sbjct: 143 LNYIVMFFWVIVIIIPVFCFATLPRCHPKQDH 174


>Z79639-2|CAB01915.1|  367|Caenorhabditis elegans Hypothetical
           protein F54E4.2 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +2

Query: 203 VKLFSRSFASLVLVLVTQSKSSRVRGSCMIILFVLPCSLRYSYFCIIYL 349
           V L    F  L  +L   S        C I  F L CS  YS +C +++
Sbjct: 69  VNLVLSCFEMLTYLLSITSSEQAASILCKIAEFTLRCSYTYSMYCWLFM 117


>AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.3 protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 152 IIESAITCIRSEPNQMYVKLFSRSFASLVLVLVTQSKSSRVRG 280
           +IE AIT   S P  +Y+K   R   S    L  ++  SR+RG
Sbjct: 834 VIEQAITMFPSSPQALYLK--GRLLVSRCQKLADETLVSRIRG 874


>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 211 QLDIHLIWFRPNASDGTFNYRNAVPYTHA 125
           Q+D+ +++F PN +   FN  NA+   H+
Sbjct: 144 QIDLMIVFFSPNEAQKKFNELNAIITDHS 172


>AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical
           protein Y39B6A.31 protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 178 NASDGTFNYRNAVPYTHADY*SFS 107
           N  +GTFN R+A+ +TH +  ++S
Sbjct: 143 NVLEGTFNQRHAISFTHLNSSTYS 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,143,591
Number of Sequences: 27780
Number of extensions: 313762
Number of successful extensions: 686
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)