Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c05
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.43 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.2  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +2

Query: 194 KKRSCTHQL*GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGY 352
           KK  CT ++  DT C++FS    +   +K+I     L  +I    V+ F  G+
Sbjct: 141 KKGVCTMEINSDTMCVTFSNLGIQCVKKKDIESALRLREEI---KVDPFMTGF 190


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 416 SNGFNVMGFSQGCQF 460
           + G+ VMGF++ C+F
Sbjct: 288 TKGYGVMGFNEICEF 302


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 257  SFKIFLEKNIPGVYVLSLQI 316
            +F  F +KN  GVY+  LQ+
Sbjct: 1261 NFTYFEDKNEIGVYITYLQL 1280


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 257  SFKIFLEKNIPGVYVLSLQI 316
            +F  F +KN  GVY+  LQ+
Sbjct: 1261 NFTYFEDKNEIGVYITYLQL 1280


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 623 YMQRN*VASSHHHMF-RVSRHHNE 555
           Y +++    SHHH    V+ HH+E
Sbjct: 4   YFEQSGFYGSHHHQSGSVAGHHHE 27


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 228 SPQSWWVQLRFFGSNSLLFVTEIDSL 151
           +P ++W+QLR  G   +  V ++  L
Sbjct: 402 TPGAYWIQLRGLGECGIRRVQQLGIL 427


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 228 SPQSWWVQLRFFGSNSLLFVTEIDSL 151
           +P ++W+QLR  G   +  V ++  L
Sbjct: 402 TPGAYWIQLRGLGECGIRRVQQLGIL 427


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 605 VASSHHHMFRVSRHHNEV 552
           + + HHH+ ++ R  NE+
Sbjct: 854 ICTLHHHLSKLIRLFNEI 871



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 605  VASSHHHMFRVSRHHNEV 552
            + S HHH+ ++ +  NE+
Sbjct: 1304 LCSLHHHLSKLIKSFNEI 1321


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 94  RIHQSSSSCC*LTLDVQIHQTVYFCH 171
           RI+   SS C      Q H T Y CH
Sbjct: 61  RINLCDSSPCLNGATCQDHTTHYTCH 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,456
Number of Sequences: 336
Number of extensions: 4081
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)