Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c05
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.54 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.8  
AY341179-1|AAR13743.1|  191|Anopheles gambiae Gambif protein.          23   8.8  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 601 LPHIITCFVSQGTTMRYAIDA 539
           +PH+  C +S GTT RY   A
Sbjct: 394 VPHVSQCPISPGTTFRYTFRA 414


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 397 SGRSKTIKRIQCHGFLTGMSVYSSCSTK 480
           +   KT   IQ HG+     V  SC TK
Sbjct: 81  TAEQKTFPSIQVHGYRGRAVVVVSCVTK 108


>AY341179-1|AAR13743.1|  191|Anopheles gambiae Gambif protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 397 SGRSKTIKRIQCHGFLTGMSVYSSCSTK 480
           +   KT   IQ HG+     V  SC TK
Sbjct: 17  TAEQKTFPSIQVHGYRGRAVVVVSCVTK 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,955
Number of Sequences: 2352
Number of extensions: 16608
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)