Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2c05
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   167   5e-42
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   167   5e-42
Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical pr...    32   0.32 
AF003144-2|AAB54193.2|  217|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  167 bits (407), Expect = 5e-42
 Identities = 76/150 (50%), Positives = 104/150 (69%)
 Frame = +2

Query: 224 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 403
           GD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C K+  
Sbjct: 6   GDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKN 65

Query: 404 DPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHET 583
           DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  
Sbjct: 66  DPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIM 122

Query: 584 CDDVRKLLNYAAYNSWVQNSLVQATYWHDP 673
           C+ VR+L++  AY  +VQ  +VQA YWHDP
Sbjct: 123 CNGVRRLIDLGAYLPFVQKRVVQAQYWHDP 152


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  167 bits (407), Expect = 5e-42
 Identities = 76/150 (50%), Positives = 104/150 (69%)
 Frame = +2

Query: 224 GDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVCEKLAA 403
           GD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C K+  
Sbjct: 6   GDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKN 65

Query: 404 DPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHET 583
           DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  
Sbjct: 66  DPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIM 122

Query: 584 CDDVRKLLNYAAYNSWVQNSLVQATYWHDP 673
           C+ VR+L++  AY  +VQ  +VQA YWHDP
Sbjct: 123 CNGVRRLIDLGAYLPFVQKRVVQAQYWHDP 152


>Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical
           protein C31H5.6 protein.
          Length = 446

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 365 NLQVEYVCEKLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQH 535
           ++ VEY  + +     LS   N++G  QG  F   +V     + PQIK +VS+ G H
Sbjct: 211 DVDVEYFLKPIEFVLGLSYTTNMLGI-QGVSFGATIVDLLSTRYPQIKAVVSINGPH 266


>AF003144-2|AAB54193.2|  217|Caenorhabditis elegans Hypothetical
           protein C55C2.3 protein.
          Length = 217

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 45  FNLMYCFIAIIII 83
           +NLMYCF AI+II
Sbjct: 173 YNLMYCFFAILII 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,078
Number of Sequences: 27780
Number of extensions: 373693
Number of successful extensions: 804
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)