Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2c03
(742 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 280 1e-76
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 149 3e-37
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 142 5e-35
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 134 9e-33
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 128 1e-30
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 104 1e-23
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 102 6e-23
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 100 2e-22
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 2e-05
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 41 2e-04
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 30 0.40
SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|ch... 27 2.8
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 26 6.5
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos... 25 8.6
SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces pombe... 25 8.6
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 280 bits (687), Expect = 1e-76
Identities = 129/221 (58%), Positives = 168/221 (76%)
Frame = +1
Query: 79 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 258
Q P+ V++ N R+ G K Q+ NI A K +ADVIRTCLGP+AMLKML+DP+G +++TNDG
Sbjct: 2 QSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDG 61
Query: 259 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 438
+AILREI V HPAAKSMIE+ARTQDEEVGDGTTSVI+LAGE+LA A P L + IHP V+I
Sbjct: 62 HAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMI 121
Query: 439 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNT 618
R ++QALEDA+ ++ D+I++PV+++D +M +IR+C+GTK + RW T
Sbjct: 122 RSFKQALEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRT 180
Query: 619 VTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKD 741
V NGR+E+DIK YA+VEK+PGG +E S VL GVM NKD
Sbjct: 181 VASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKD 221
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 149 bits (362), Expect = 3e-37
Identities = 79/221 (35%), Positives = 129/221 (58%), Gaps = 1/221 (0%)
Frame = +1
Query: 79 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 258
Q P++VL + T GR L NI+A + D IRT LGP K+++D G +V++NDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 259 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 438
I++ + + HPAAK++++IAR QD EVGDGTTSV+V AGE+L A F+ + +II
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 439 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRW-XXXXXXXXXXXXN 615
R YR+A + A+ +++ I++ +DL+D K+++++ C T + +
Sbjct: 127 RGYRKAAQLAVNKIKE-IAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVD 185
Query: 616 TVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNK 738
V D + +N ++K+PGG +E+S ++ GV F K
Sbjct: 186 AVLTLDQEDLN---ENMIGIKKVPGGAMEDSLLVKGVAFKK 223
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 142 bits (344), Expect = 5e-35
Identities = 70/204 (34%), Positives = 125/204 (61%)
Frame = +1
Query: 115 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 294
RE ++V+L NI A +++AD IRT LGP+ M KM+ G +++TNDG IL+ ++V HP
Sbjct: 14 REKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP 73
Query: 295 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 474
AAK +++++ QD E GDGTTSV++LAG MLA AE L + IHPTVI +++A +
Sbjct: 74 AAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVD 133
Query: 475 LLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVD 654
+++ ++ ++L+DR+ + + + +K + ++ V ++ VD
Sbjct: 134 CMKEN-ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKV-IDPRVATNVD 191
Query: 655 IKNYAKVEKIPGGTVEESRVLSGV 726
+K+ V+K+ GG ++++ ++ G+
Sbjct: 192 LKDIRIVKKL-GGIIDDTELIPGL 214
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 134 bits (325), Expect = 9e-33
Identities = 73/206 (35%), Positives = 115/206 (55%), Gaps = 1/206 (0%)
Frame = +1
Query: 121 SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAA 300
SG V+ +N+ A IA+V+++ LGP + KML+D +G + +TNDG IL + V+HPA
Sbjct: 18 SGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAG 77
Query: 301 KSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLL 480
K ++E+A+ QD+EVGDGTTSV+++A E+L A + IHPT II YR A+ +A+ +
Sbjct: 78 KVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFM 137
Query: 481 QDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTV-TVNDNGRIEVDI 657
D +S VD ++ + V ++ + +K IG +V T N G +
Sbjct: 138 TDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPV 197
Query: 658 KNYAKVEKIPGGTVEESRVLSGVMFN 735
K + K G + ES ++ G N
Sbjct: 198 K-AVNILKAHGKSSRESVLVKGYALN 222
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 128 bits (308), Expect = 1e-30
Identities = 78/225 (34%), Positives = 130/225 (57%), Gaps = 3/225 (1%)
Frame = +1
Query: 76 GQQPILVLSQNTKRE-SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTN 252
G ILV Q KR G +I A KT+A+++RT LGP+ + K+L+ P G I +TN
Sbjct: 15 GNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTN 74
Query: 253 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 432
DG IL ++ V+H AK +++++++QD+E+GDGTT V+VLAG +L AE + + IHP
Sbjct: 75 DGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIR 134
Query: 433 IIREYRQALEDAIVLLQDKISVPVDLNDRD--KMKEVIRSCVGTKYIGRWXXXXXXXXXX 606
I Y +A + A+ L D IS VD + + + ++ +G+K + +
Sbjct: 135 IADGYEKACQVAVKHL-DAISDVVDFSPENTTNLFRSAKTSLGSKVVSK--AHDHFANIA 191
Query: 607 XXNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKD 741
++V D R +VD + KV+ GG+V++++++ GV+ +KD
Sbjct: 192 VDAVLSVADLQRKDVDFE-LIKVDGKVGGSVDDTKLVKGVVVDKD 235
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 104 bits (250), Expect = 1e-23
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
Frame = +1
Query: 85 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM-DPMGGIVMTNDGN 261
P + +++ +E G +L + + D++++ LGP+ M K+L + G IV+TNDG
Sbjct: 5 PHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGA 64
Query: 262 AILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIR 441
IL+ I + + AAK ++ I++ QD+EVGDGTTSV V A E+L AE + IHP VII
Sbjct: 65 TILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIID 124
Query: 442 EYRQALEDAIVLLQ----DKISVPVDLNDRDKMKEVIRSCVGTKYIGR 573
YR A + AI L+ D S P R ++ + R+ + +K + +
Sbjct: 125 GYRIATKTAIDALRASSIDNSSDPAKF--RSDLENIARTTLSSKILSQ 170
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 102 bits (244), Expect = 6e-23
Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Frame = +1
Query: 106 NTKRESGRKVQL--ENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 279
N K ES ++ Q NISA + DV+++ LGP KML+D G I +T DG +L E+
Sbjct: 6 NPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEM 65
Query: 280 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 459
+Q+P A + + A QD+ GDGTTSV +L GE+L AE ++ + +HP++I + A
Sbjct: 66 QIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAK 125
Query: 460 EDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTK 561
+A+ L D ++ DR+ + V ++ + TK
Sbjct: 126 NEALTFL-DSFKTDFEV-DREVLLNVAKTSLSTK 157
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 100 bits (240), Expect = 2e-22
Identities = 57/202 (28%), Positives = 107/202 (52%), Gaps = 1/202 (0%)
Frame = +1
Query: 139 LENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEI 318
+ N +A + ++++ RT LGP K++++ + +TND I+RE+ V HPAAK +++
Sbjct: 29 IRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDA 88
Query: 319 ARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISV 498
+ Q+ E+GD V+V GE+LA AE + + P I + Y AL + +L++ +
Sbjct: 89 TQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD 148
Query: 499 PVDLNDRDK-MKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVDIKNYAKV 675
++ + +K + + IR+C+ +K G TV D + VD +V
Sbjct: 149 KIETVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVD---NIRV 204
Query: 676 EKIPGGTVEESRVLSGVMFNKD 741
KI G ++ S+V+ G++F ++
Sbjct: 205 VKIMGSSLYNSQVVKGMVFPRE 226
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 163 TIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKSMIEIARTQ 330
T+A + LGP+ ++ P G +T DG + R +++ ++ A+ + ++A
Sbjct: 53 TLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKT 112
Query: 331 DEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQ 483
+E GDGTT+ VL + + + +P + R + A+++ + LQ
Sbjct: 113 NEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQ 163
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 41.1 bits (92), Expect = 2e-04
Identities = 12/31 (38%), Positives = 28/31 (90%)
Frame = +1
Query: 646 EVDIKNYAKVEKIPGGTVEESRVLSGVMFNK 738
++D+++Y K++KIPGG++++ +++GV+F+K
Sbjct: 518 DIDVRSYVKIKKIPGGSIQDCFLVNGVLFSK 548
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.40
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 210 KNVNGPY---GRHRDDQRW*CYTQGNHSPTSSCKIYDRNRKDPR*RGWRWNHISHSASRR 380
KN NG Y R D+ W T+ PTS + +K P + WN + A
Sbjct: 421 KNENGIYDKKARSVSDEAWSFITKCLTEPTSRFQSTIEIQKHPFFKRLHWNGLRKRAVPP 480
Query: 381 NVGDCRTFLDTEYSSNSHHQRIPPSFRGCY 470
V LDT Y + + +++ +++ Y
Sbjct: 481 FVPRLENQLDTSYFDDFNDEQVLDAYKDVY 510
>SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -2
Query: 150 NIFKLNFPAGLTFCILAEN*YRLLSIHFEKIKCVLLFKLQK 28
N KL F L C L Y SIH IK +L KLQK
Sbjct: 113 NCNKLQFQISLLRCCLRIVPYSAESIHGRIIKLLLYTKLQK 153
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 226 PMGGIVMTNDGNAILREITVQHPAAKSMI 312
P GGI+ ++ NA + QHP A ++
Sbjct: 16 PAGGIMSVSNSNADTNQGVTQHPLANRIV 44
>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +1
Query: 370 LAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMK 531
L+G ++A A + + I+++++ D ++ L ++PV D K+K
Sbjct: 216 LSGAVVAFAPDASSSLLFELADIKQHKKTSADILIFLSKDHNLPVSFYDNYKLK 269
>SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 726 NTAEYTRLFNCATWDLFHFCI 664
N A Y+ L N TW+LF CI
Sbjct: 516 NAANYSAL-NRVTWELFDICI 535
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,022,204
Number of Sequences: 5004
Number of extensions: 61696
Number of successful extensions: 173
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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