Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b21
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 232  GAPRGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKFKK 354
            G P    +VPP   SS P    S   P       P +KF K
Sbjct: 1103 GVPLKGTAVPPPSGSSGPGSTGSKSPPVAGFEESPHSKFLK 1143


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +1

Query: 103 LRESAKASSKKEVIVVHS----EKIEYSNGLNT-LKAELEEEVDIIDLGAP 240
           +RE+    S K + VV++    E +E    +   LKA++E +V  ID G P
Sbjct: 294 IREAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRP 344


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 392 NPRKPNNQSASGSSAGPCPTRG 457
           N R  N  +A   S GPCP +G
Sbjct: 36  NRRMVNYYAACLLSKGPCPPQG 57


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 482 GGGGPGLYSRALG 444
           GGG PG Y+ A G
Sbjct: 293 GGGSPGPYTNATG 305


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 182 KPLLYSIFSECTTMTS 135
           +P+LY IFS C  +T+
Sbjct: 152 EPILYLIFSYCPIVTT 167


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 391 EPKETQQSKRK-RFFRRPVPNARLYRPGPPPPK 486
           EP++   S    + F  P+PN   +   P PP+
Sbjct: 392 EPRDKAPSPYGGQMFEAPIPNVSPHYVTPTPPE 424


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.128    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,954
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)