Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b08
         (247 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   0.37 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   0.37 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   6.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    19   7.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    19   7.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    19   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 0.37
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 51  KRKCIKFPYSGYGGNVNRF-DSLNEC 125
           K+KCI++  +G G + N+  D+L  C
Sbjct: 635 KKKCIRYMEAGDGNDGNQSDDNLGSC 660


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.37
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 51  KRKCIKFPYSGYGGNVNRF-DSLNEC 125
           K+KCI++  +G G + N+  D+L  C
Sbjct: 527 KKKCIRYMEAGDGNDGNQSDDNLGSC 552


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 143 RITRFYAFI*RIKSVYVPSIARVRKFNAFP 54
           R TRF  F   IK  Y P +  +    A+P
Sbjct: 254 RATRFNDFNEAIKEAYFPKLDSLVSSRAWP 283


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 228 VSNFNLLHIFVVLVHF*QLCSNFPVII 148
           + NF  L + V   HF  +C  FP+ I
Sbjct: 17  MKNFKYLKVLVTFAHF--ICL-FPITI 40


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +3

Query: 30 RYAYDLNKRKCIKF 71
          RY +    +KC+K+
Sbjct: 43 RYTWKCENQKCVKY 56


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  YFRYAYDLNKRKCIKFP 74
           Y R+   LNK K ++FP
Sbjct: 107 YERFDILLNKSKNLQFP 123


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  YFRYAYDLNKRKCIKFP 74
           Y R+   LNK K ++FP
Sbjct: 107 YERFDILLNKSKNLQFP 123


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  YFRYAYDLNKRKCIKFP 74
           Y R+   LNK K ++FP
Sbjct: 107 YERFDILLNKSKNLQFP 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,994
Number of Sequences: 336
Number of extensions: 920
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3749515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)