Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b08
         (247 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   5.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         19   6.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    19   6.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   6.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    19   6.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 61  HFLLFKS*AYLK 26
           H++ FKS +YLK
Sbjct: 465 HYVAFKSLSYLK 476


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  CIKFPYSGYGGNVNRFDSLNE 122
           C+     G  GN+ R +SLN+
Sbjct: 9   CLGIVCQGTTGNILRGESLNK 29


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  CIKFPYSGYGGNVNRFDSLNE 122
           C+     G  GN+ R +SLN+
Sbjct: 9   CLGIVCQGTTGNILRGESLNK 29


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 123 IHLKNQICLRSLHSPSTEI*CISFCSSHRRT 31
           +H  N+I  R L S +  +  ++FC ++  T
Sbjct: 246 VHAVNEIEKRLLFSHNDRLGFLTFCPTNLGT 276


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  CIKFPYSGYGGNVNRFDSLNE 122
           C+     G  GN+ R +SLN+
Sbjct: 9   CLGIVCQGTTGNILRGESLNK 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,717
Number of Sequences: 438
Number of extensions: 980
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)