Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b07
         (811 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8T101 Cluster: Titin-like protein; n=4; Endopterygota|...    70   6e-11
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    61   3e-08
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    42   0.018
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2...    40   0.098
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    37   0.69 
UniRef50_A2FLN6 Cluster: Putative uncharacterized protein; n=1; ...    36   0.91 
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C...    36   1.6  
UniRef50_Q3ASJ4 Cluster: Exodeoxyribonuclease V, RecC subunit; n...    34   4.9  
UniRef50_A1R9C1 Cluster: Putative uncharacterized protein; n=2; ...    34   4.9  

>UniRef50_Q8T101 Cluster: Titin-like protein; n=4; Endopterygota|Rep:
            Titin-like protein - Bombyx mori (Silk moth)
          Length = 3354

 Score = 70.1 bits (164), Expect = 6e-11
 Identities = 37/68 (54%), Positives = 43/68 (63%)
 Frame = +2

Query: 380  LNTTEHDS*FLSSSLESRPA*IVTPPSLRASCSTLANSRFPHKNTVTPTIIGSPDNMGGL 559
            L  TEHD  FL SS    P+ I+TP SLRASC+  +NSR P KN +TP  IG P NM   
Sbjct: 825  LLATEHDPRFLPSSSYQPPSQIITPLSLRASCTAFSNSRSPFKNALTPMAIGCPANMASP 884

Query: 560  LRLQLTDL 583
            L  QLT+L
Sbjct: 885  LPPQLTNL 892


>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 61.3 bits (142), Expect = 3e-08
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -1

Query: 583 KISKLESQ*ATHIIRRTDNCWGNRVLVWKPRICQR*TGRPQARWSDDLCRAA 428
           +I+K++ Q A HI RR D  WG +VL W+PR  +R  GRP  RW+DDL + A
Sbjct: 417 RIAKIKWQWAGHIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTDDLVKVA 468


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 41.9 bits (94), Expect = 0.018
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -3

Query: 335 MGDGNHSPSGGPYPCLPTRAIKK 267
           MGDGNHSPSG PY  LPTRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
           F28E10.3 [imported] - Caenorhabditis elegans; n=4;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           protein F28E10.3 [imported] - Caenorhabditis elegans -
           Strongylocentrotus purpuratus
          Length = 824

 Score = 39.5 bits (88), Expect = 0.098
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -1

Query: 556 ATHIIRRTDNCWGNRVLVWKPRICQR*TGRPQARWSDDL 440
           A HI RR DN W + +  W P   +R  GR + RW D+L
Sbjct: 365 AGHISRRNDNRWSSAITHWTPYEGKRNRGRQRKRWRDEL 403


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 36.7 bits (81), Expect = 0.69
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 387  VFNGRQRPGSALGIAEVHGRR 325
            V +GRQR GSA GIAEVHGRR
Sbjct: 966  VLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_A2FLN6 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2865

 Score = 36.3 bits (80), Expect = 0.91
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +1

Query: 211  DPSSLSLSSATDGHRPFQ-YFFIAL-VGRQGYGPPDGEWL-PSPMDF--SNAKGRARPLP 375
            DPSS  L  A +G  P +   FI    GR G  PP  +W+ P  + F  S A+   +PLP
Sbjct: 2757 DPSSTMLWDALEGFTPEERMLFIKFGTGRMGLPPPGSKWMTPLQIQFKMSEAQDAQKPLP 2816

Query: 376  T 378
            T
Sbjct: 2817 T 2817


>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
           Caenorhabditis elegans|Rep: Uncharacterized protein
           F52C9.6 - Caenorhabditis elegans
          Length = 279

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 556 ATHIIRRTDNCWGNRVLVWKPRICQR*TGRPQARWSDDL 440
           A H+ RR D  W   +  W+P   +R  GR   RW+D L
Sbjct: 203 AGHVARRKDGRWTTLMTEWRPWNWKRYVGRTPMRWTDSL 241


>UniRef50_Q3ASJ4 Cluster: Exodeoxyribonuclease V, RecC subunit; n=4;
            Chlorobium|Rep: Exodeoxyribonuclease V, RecC subunit -
            Chlorobium chlorochromatii (strain CaD3)
          Length = 1127

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -3

Query: 389  LCLTVGSGLALPLALLKSMGDGNHSPSGGPYPCLPTRAIKKYWKGLC 249
            LC    +G  L   +L S G+ ++ P   P+  L T  +++YW+GLC
Sbjct: 988  LCALQPTGYPLTTHMLMSDGEWSYPPIDNPHQHLTT-LLQRYWQGLC 1033


>UniRef50_A1R9C1 Cluster: Putative uncharacterized protein; n=2;
           Arthrobacter aurescens TC1|Rep: Putative uncharacterized
           protein - Arthrobacter aurescens (strain TC1)
          Length = 79

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 371 CLPLNTTEHDS*FLSSSLESRPA*IVTPPSLRASCSTLANSRFPHKNTVTPTIIGSPDN 547
           C P  T+E+D+ F ++   +        P    + +T  N   P +NT TPT    PDN
Sbjct: 16  CDPAGTSENDTTFSTTGSAATADGNTNNPGATTTNTTATNHATPRRNTATPTHRRHPDN 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,022,119
Number of Sequences: 1657284
Number of extensions: 17406525
Number of successful extensions: 38990
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38955
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)