Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b05
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.48 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.4  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 311 HPYCFGTSVYKSVFSLNFQLLL 246
           +PYCF +SVYK VF +   L +
Sbjct: 180 NPYCFNSSVYK-VFPVEHLLFI 200


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/49 (22%), Positives = 18/49 (36%)
 Frame = +3

Query: 324 PKFPEGHAVTRQLSSNYLSKPDAITQRAMFNADATYDWEYAEQNNWWKK 470
           P  P+G  + R L     +     T +    A       Y  + +WWK+
Sbjct: 54  PCTPDGEELKRVLPDALKTSCAKCTDKQKQGAKTVIQHLYKNKQDWWKQ 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,450
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)