Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b05
         (732 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264...    33   0.18 
10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231...    29   2.9  
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954...    29   3.8  
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624...    28   8.8  

>12_01_0343 +
           2640822-2641106,2641488-2641556,2641708-2641887,
           2642015-2642081,2643237-2644015
          Length = 459

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
 Frame = +3

Query: 453 NNWWK---KYPQCG-GRSQSPVDIPVKGLIKARRGRPLLFCNYDVPPENMTLIKDERRVT 620
           +NW K   +Y  CG GRSQSP+DI  K ++  R     L  NY+    N T++ + + +T
Sbjct: 221 SNWGKLSPEYRMCGEGRSQSPIDINTKTVV-PRSDLDTLDRNYNA--VNATIVNNGKDIT 277

Query: 621 L 623
           +
Sbjct: 278 M 278


>10_07_0116 -
           13022648-13022701,13022781-13022835,13023050-13023175,
           13023274-13023340,13024104-13024200,13024362-13024461,
           13024527-13024611,13024679-13024755,13024888-13024926,
           13025001-13025038,13025118-13025208,13025536-13025628,
           13025726-13025781,13025844-13025915,13026078-13026134,
           13026397-13026495,13026599-13026964
          Length = 523

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 330 FPEGHAVTRQLSSNYLSKPDAITQRAMFNADA-TYDW--EYAEQN 455
           F E  A T+QL  +YL K   + QR  + +    YDW  + AE+N
Sbjct: 327 FLEAPAATKQLPEDYLEKVKEVHQRGGYGSKGYGYDWKRDEAEKN 371


>01_02_0099 +
           11092529-11093140,11094153-11094424,11095378-11095438,
           11095553-11095622,11095645-11095901,11096466-11096639
          Length = 481

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 664 RVITDDVFGSQNPVRVTLLSSLINVIFSGGTS 569
           R  +DD  G  NPVR  ++ SL++++ S G S
Sbjct: 369 RATSDDTLGHCNPVRGIVVVSLLSMVESSGES 400


>07_03_1219 +
           24960043-24960133,24960304-24960336,24962258-24962486,
           24963183-24963309,24963530-24963869,24964806-24965095
          Length = 369

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = +3

Query: 231 DADDIQKQLEIEAKNRFVYGSPKAIWVFHL-----PPKFPE 338
           D +D  +Q + E +N  +YG P   W  +L     PP+ PE
Sbjct: 31  DVEDFFRQCDPEKENLCLYGFPNEHWEVNLPAEEVPPELPE 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,735,513
Number of Sequences: 37544
Number of extensions: 406901
Number of successful extensions: 961
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)