Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b05
         (732 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)               36   0.026
SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)        36   0.034
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)         29   2.9  
SB_46949| Best HMM Match : DUF77 (HMM E-Value=5.5)                     28   6.8  

>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 722

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 390 AITQRAMFNADATYDWEYAEQ--NNWWKKYPQCGGRSQSPVDIPVKGLIKARRGRPLLFC 563
           A+   ++  A    DW+Y  +  + W   + QC G SQSP+DI    +   +    L F 
Sbjct: 415 ALVVLSLLGASLAADWDYDSKGPSKWSSSFSQCNGSSQSPIDIITSSVAFDQSLGELQFV 474

Query: 564 NYDVPP 581
           N+D  P
Sbjct: 475 NFDTIP 480


>SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)
          Length = 291

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 417 ADATYDWEYAEQ---NNWWKKYPQCGGRSQSPVDI 512
           AD   DW Y E    + W   +P CGG+ QSP++I
Sbjct: 27  ADPMGDWSYDEATGPSTWPNHFPHCGGKKQSPINI 61


>SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)
          Length = 252

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 453 NNWWKKYPQCGGRSQSPVDIPVKGLIKARRGRPLLFCNYD-VPPENMTLIKDERRVTLTG 629
           ++W  +YP C G SQSP++I    ++       L F N+D +P     ++++        
Sbjct: 115 DHWANRYPACNGSSQSPINIVTSSVMYDSSLGKLQFNNFDRIPSGAKIMVRNNGHAFQVN 174

Query: 630 FWDP 641
           F  P
Sbjct: 175 FMTP 178


>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4529

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 311 HPYCFGTSVYKSVFSLNFQLLLNXXXXXXXXXXXXSRLIMCELC 180
           HPYC G  V K + S  ++ L              +RL++C+ C
Sbjct: 778 HPYCVGVKVNKMILSKGWRCLDCTLCEGCGKGSDEARLLLCDSC 821


>SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)
          Length = 338

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 453 NNWWKKYPQCGGRSQSPVDIPVKGLIKARR 542
           ++W   YP+C G +QSP++I    + +  R
Sbjct: 22  DDWASAYPECKGLAQSPINIVTSKVTRVSR 51


>SB_46949| Best HMM Match : DUF77 (HMM E-Value=5.5)
          Length = 160

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 339 GHAVTRQLSSNYLSKPDAITQRAMFNADATYDWEYAEQNNWWKK 470
           G ++  +L  +  SKP  I      +   +Y+W Y   N WW+K
Sbjct: 21  GDSLAVRLHGSMASKP--ICTSIFSSCRVSYNWIYPVGNEWWEK 62


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,946,508
Number of Sequences: 59808
Number of extensions: 466724
Number of successful extensions: 1156
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)