Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b05
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    30   0.064
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    26   1.0  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    25   1.8  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    24   4.2  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   5.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.7  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   9.7  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 30.3 bits (65), Expect = 0.064
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +3

Query: 435 WEYAEQNN---WWKKYPQCGGRSQSPVDI 512
           W Y + N    W + +PQ  G+ QSPVDI
Sbjct: 5   WGYTQMNGPQKWPEMFPQARGQRQSPVDI 33


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 429 YDWEYAEQNNWWKKYPQCGGRSQSPVDI 512
           + +   +Q  W K +  C G  QSP+ I
Sbjct: 35  FGYSKPDQRRWSKAHQSCAGAHQSPIAI 62


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 640 RKHRPLLHGGAAHSHRYVFYSLSLHW 717
           R  RP + GG    ++Y+F  L  HW
Sbjct: 57  RPFRPFIVGGVL-GNKYIFEQLHFHW 81


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 667 GAAHSHRYVFYSLSLHWPSEHT 732
           G     R+V   +  HW SEHT
Sbjct: 102 GGGLGGRFVLDQMHFHWGSEHT 123


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +3

Query: 531 KARRGRPLLFCNYDVPPENMTLIKDERRVTL------TGFWDPKTSSVITRRRSSQPSLR 692
           + RRG   +F    V   N  L  DE+R+ +      T   +P T++++  RRS Q S+ 
Sbjct: 497 RTRRGTCRIFIGPKVDERNTGLTMDEQRLLMIELDKFTVNLNPGTNNIV--RRSEQSSVT 554

Query: 693 I 695
           I
Sbjct: 555 I 555


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 671 APPCNNGRCFRIPESRE 621
           +P C+ GRCF  P+ RE
Sbjct: 185 SPQCSQGRCFG-PKPRE 200


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 620 PHGILGSENIVRYYTEAQLTAIATYSIRCPFTGP 721
           P+GI  +   + + T+ + TA+   ++  P T P
Sbjct: 312 PYGIREATERIEFKTQRRATAMTEDAVHYPSTSP 345


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,189
Number of Sequences: 2352
Number of extensions: 15751
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)