Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b05
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.2  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   5.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.8  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   9.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 578 TRKYDIN*RREESDPHGILGSENIVRYYTEAQLTAIA 688
           TR   IN R+++  P+G L  EN+ R   +A  T +A
Sbjct: 528 TRVLPIN-RKQKVFPNGTLIIENVERMSDQATYTCVA 563


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 276  RFVYGSPKAIWVFHLPPKFPEG 341
            + V  SP+A+++  LPP  P G
Sbjct: 1221 KVVVSSPQALFISWLPPLEPNG 1242


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 276  RFVYGSPKAIWVFHLPPKFPEG 341
            + V  SP+A+++  LPP  P G
Sbjct: 1217 KVVVSSPQALFISWLPPLEPNG 1238


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 429 YDWEYAEQNNWWKKYPQCGGRSQSPVDIPV 518
           Y   Y   NN+ K Y       Q P+ +PV
Sbjct: 313 YSNNYYNNNNYKKLYYNINYIEQIPIPVPV 342


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 691 VFYSLSLHWPSEHT 732
           +F S SL W S HT
Sbjct: 488 IFMSSSLQWSSTHT 501


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 691 VFYSLSLHWPSEHT 732
           +F S SL W S HT
Sbjct: 526 IFMSSSLQWSSTHT 539


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 429 YDWEYAEQNNWWKKYPQCGGRSQSPVDIPV 518
           Y++     NN+ K Y       Q PV +PV
Sbjct: 104 YNYNNNNYNNYKKLYYNINYIEQIPVPVPV 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,990
Number of Sequences: 438
Number of extensions: 4327
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)