Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2b02
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    51   3e-08
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.46 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   1.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.5  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    25   2.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.7  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   9.9  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
 Frame = +1

Query: 151 VYEWNAIDFEWTSPEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVPATLAT 330
           V +W  ++++  +    E     + YIP   +  G   +   +F+ + R   G+P+TL  
Sbjct: 26  VLKWQRVEYDVPA----EVLQRENGYIPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNV 81

Query: 331 IPIQQ--VNTAPKLKPFPSWADNAI-----GNCNALQFVQNIEIDRNGIMWILDNGRVGT 489
           + +     NT   LKP+P++A N +      + N +  V    +DR   +W +D G +  
Sbjct: 82  VDLSPPFPNTNVILKPYPNFALNELRADLQPDANRIVTVYRPRVDRCDRLWFVDTGMM-E 140

Query: 490 LTQNPDPKCPPSIVLIDLKSEKLEMERIPFPPETVNPNTTYLN-DLVVDNRDGDYAYITD 666
           +  N      PS+  IDL + +  + R   P E V       +  L VD  D +  ++  
Sbjct: 141 IPGNFTVVQRPSVWSIDLNTNE-PIHRFEIPKEAVETGYGLTSITLDVDPSDCEKVFVYI 199

Query: 667 NSAVDPGIIVFRRSDKRSWK 726
           +      ++V+  +++R+W+
Sbjct: 200 SDLQTYRMVVYDYANRRAWR 219



 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 367 KPF-PSWADNAIGNCNALQFVQNIEIDRNGIMWILDNGRVGTL 492
           KPF P        N   + +  ++ ID+NG +W + N  +  L
Sbjct: 338 KPFAPQNMAIVYKNDRDIVYPNDLSIDQNGYVWFMTNSIIKLL 380


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 190 PEDREAYLNTSQYIPQNVLISGINFYGENLFLTMPRMLAGVP 315
           P+D EA++  +Q + QN L   +  YG    +   ++ A +P
Sbjct: 408 PDDVEAWIELAQILEQNDLQGSLQAYGTATSILTEKVNADIP 449


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 395 PSVTATLYNSFKT*KLIGTVLCGFSITDEWALLP-RTLTRSVLRQ 526
           PS    ++ SF+T   + T      +  +W +LP RTL   ++ Q
Sbjct: 308 PSARVEMFGSFRTGLYLPTSDIDLVVIGQWTMLPLRTLEMELISQ 352


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +1

Query: 262  FYGENLFLTMPRMLAGVPATLATIPIQQV-----NTAPKLKPFPSWADN 393
            F  E+ FL   + +A   A  + +P ++V     N A K   FPSWA N
Sbjct: 929  FSRESRFLESEQRVATPTAIESVLPWKRVDESDDNGAIKQNEFPSWASN 977


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -3

Query: 721 TISCHFCGRQLY--LDPRHCYRLCT 653
           ++ C +C    Y  LDP H YR+ T
Sbjct: 490 SLRCRYCSVPHYEPLDPEHVYRVAT 514


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 90  RGGDGGEEHYSYHH 49
           R G GG  H+ +HH
Sbjct: 426 RSGGGGRHHHHHHH 439


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 509 RSVLRQSCSSILNLKNLKWNGFRSR 583
           R + + SC  +LN  N  W   RSR
Sbjct: 312 RRMRKSSCLKMLNRPNWTWQTGRSR 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,667
Number of Sequences: 2352
Number of extensions: 17406
Number of successful extensions: 36
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)