Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a23
         (102 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0191 + 1508509-1508749,1508852-1509204,1509860-1510002,151...    27   2.7  
12_01_0197 + 1456296-1456668,1456930-1458746                           25   8.3  

>11_01_0191 +
           1508509-1508749,1508852-1509204,1509860-1510002,
           1510195-1510256,1510406-1510479,1510812-1510864,
           1511072-1513550
          Length = 1134

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 97  SDDGVNNCGFYNIFN 53
           S DG  +CGFYNI N
Sbjct: 367 SSDGTFSCGFYNITN 381


>12_01_0197 + 1456296-1456668,1456930-1458746
          Length = 729

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 97 SDDGVNNCGFYNI 59
          S DG  +CGFYNI
Sbjct: 49 SSDGTFSCGFYNI 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,617,436
Number of Sequences: 37544
Number of extensions: 8493
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 14,793,348
effective HSP length: 15
effective length of database: 14,230,188
effective search space used: 256143384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)