Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a23
         (102 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    19   5.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    19   5.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    19   5.6  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    18   9.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 22  GPHXILXKKXD*KCCRNHN 78
           GP+ +   K    CCR H+
Sbjct: 45  GPNELGRFKHTDACCRTHD 63


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 22  GPHXILXKKXD*KCCRNHN 78
           GP+ +   K    CCR H+
Sbjct: 50  GPNELGRFKHTDACCRTHD 68


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 22  GPHXILXKKXD*KCCRNHN 78
           GP+ +   K    CCR H+
Sbjct: 50  GPNELGRFKHTDACCRTHD 68


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 67  RNHNY*HHRQTS 102
           RNH   +HRQ S
Sbjct: 49  RNHKSIYHRQHS 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777
Number of Sequences: 438
Number of extensions: 88
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 14
effective length of database: 140,211
effective search space used:  2664009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)