Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a20
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   7.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    21   9.8  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   9.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 76   GQTSRIWRHSRKSSXRAVAFPVFEW 2
            G   R WR S   +  AV  P  EW
Sbjct: 1321 GHVVRPWRGSATLACNAVGDPTREW 1345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 76   GQTSRIWRHSRKSSXRAVAFPVFEW 2
            G   R WR S   +  AV  P  EW
Sbjct: 1317 GHVVRPWRGSATLACNAVGDPTREW 1341


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 271 CVTPWFVARFVK 236
           CV P FVA FVK
Sbjct: 124 CVVPSFVADFVK 135


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 38  GFPTVTPDPGSLPLLSQTPSL 100
           G P +   PGS+P +   PS+
Sbjct: 428 GMPPLPNMPGSMPTMPTMPSM 448


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 451 NTVRFIYNFYRLSFIRKNNSVNKLYGSL 368
           NT+  IY+   L     N    +LY  L
Sbjct: 14  NTLHIIYSVAGLKIFEANPDTKRLYDDL 41


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 307 IFAAKWGFGSHVC 269
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 307 IFAAKWGFGSHVC 269
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 307 IFAAKWGFGSHVC 269
           +   KW FG H+C
Sbjct: 97  LLLGKWIFGIHLC 109


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 86  EKVGADFQDLASQSE 42
           EK   DFQD+ S SE
Sbjct: 236 EKRSTDFQDVESGSE 250


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 86  EKVGADFQDLASQSE 42
           EK   DFQD+ S SE
Sbjct: 236 EKRSTDFQDVESGSE 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,775
Number of Sequences: 438
Number of extensions: 1872
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)