Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2a18
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127702-1|AAI27703.1| 204|Homo sapiens TNFAIP8L3 protein protein. 32 1.9
BC127701-1|AAI27702.1| 204|Homo sapiens TNFAIP8L3 protein protein. 32 1.9
AY517501-1|AAS76642.1| 292|Homo sapiens hypothetical protein HC... 32 1.9
AK123281-1|BAC85572.1| 204|Homo sapiens protein ( Homo sapiens ... 32 1.9
BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin typ... 31 3.3
AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG... 31 3.3
AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein pr... 31 3.3
BC007212-1|AAH07212.1| 395|Homo sapiens zinc finger protein 659... 31 4.4
AK026072-1|BAB15350.1| 395|Homo sapiens protein ( Homo sapiens ... 31 4.4
>BC127702-1|AAI27703.1| 204|Homo sapiens TNFAIP8L3 protein protein.
Length = 204
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 NSQYNSRDLSGIHSKRVQFKSTNTTVLRLYFVQY-FSRNVFQTVL--CKSTTH 548
N+Q++ +L + R + T T++ Y V+Y F RNV +L CK H
Sbjct: 94 NNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVH 146
>BC127701-1|AAI27702.1| 204|Homo sapiens TNFAIP8L3 protein protein.
Length = 204
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 NSQYNSRDLSGIHSKRVQFKSTNTTVLRLYFVQY-FSRNVFQTVL--CKSTTH 548
N+Q++ +L + R + T T++ Y V+Y F RNV +L CK H
Sbjct: 94 NNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVH 146
>AY517501-1|AAS76642.1| 292|Homo sapiens hypothetical protein HCSM
protein.
Length = 292
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 NSQYNSRDLSGIHSKRVQFKSTNTTVLRLYFVQY-FSRNVFQTVL--CKSTTH 548
N+Q++ +L + R + T T++ Y V+Y F RNV +L CK H
Sbjct: 182 NNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVH 234
>AK123281-1|BAC85572.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ41287 fis, clone BRAMY2038484, moderately
similar to Homo sapiens MDC-3.13 isoform 2 mRNA. ).
Length = 204
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 697 NSQYNSRDLSGIHSKRVQFKSTNTTVLRLYFVQY-FSRNVFQTVL--CKSTTH 548
N+Q++ +L + R + T T++ Y V+Y F RNV +L CK H
Sbjct: 94 NNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVH 146
>BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin type 3
protein.
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 678 RELYCELCDVHITSKSHADSHYAG 749
+ LYC+LC+V + S A +HY G
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQG 91
>AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG1
protein.
Length = 288
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 678 RELYCELCDVHITSKSHADSHYAG 749
+ LYC+LC+V + S A +HY G
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQG 91
>AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12296 fis, clone MAMMA1001820, moderately
similar to Rattus norvegicus mRNA for PAG608 gene. ).
Length = 289
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 678 RELYCELCDVHITSKSHADSHYAG 749
+ LYC+LC+V + S A +HY G
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQG 91
>AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein
protein.
Length = 288
Score = 31.5 bits (68), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 678 RELYCELCDVHITSKSHADSHYAG 749
+ LYC+LC+V + S A +HY G
Sbjct: 68 KPLYCKLCNVTLNSAQQAQAHYQG 91
>BC007212-1|AAH07212.1| 395|Homo sapiens zinc finger protein 659
protein.
Length = 395
Score = 31.1 bits (67), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 669 LKSRELYCELCDVHITSKSHADSH 740
L+++ +CE+CDVH+ S++ H
Sbjct: 262 LQNKTFHCEICDVHVNSETQLKQH 285
>AK026072-1|BAB15350.1| 395|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22419 fis, clone HRC08593. ).
Length = 395
Score = 31.1 bits (67), Expect = 4.4
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 669 LKSRELYCELCDVHITSKSHADSH 740
L+++ +CE+CDVH+ S++ H
Sbjct: 262 LQNKTFHCEICDVHVNSETQLKQH 285
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,476,070
Number of Sequences: 237096
Number of extensions: 2258295
Number of successful extensions: 4490
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4489
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -