Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a16
         (434 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2IA84 Cluster: Putative secreted salivary protein; n=1...    83   2e-15
UniRef50_Q9W3N7 Cluster: CG18624-PA, isoform A; n=5; Diptera|Rep...    62   7e-09
UniRef50_Q4S729 Cluster: Chromosome 14 SCAF14723, whole genome s...    46   3e-04
UniRef50_O75438 Cluster: NADH dehydrogenase [ubiquinone] 1 beta ...    39   0.053
UniRef50_Q02378 Cluster: NADH dehydrogenase [ubiquinone] 1 beta ...    37   0.21 
UniRef50_UPI0000E49973 Cluster: PREDICTED: similar to NADH dehyd...    34   1.1  
UniRef50_A2FXE5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_A6C605 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  

>UniRef50_A2IA84 Cluster: Putative secreted salivary protein; n=1;
           Xenopsylla cheopis|Rep: Putative secreted salivary
           protein - Xenopsylla cheopis (oriental rat flea)
          Length = 59

 Score = 83.0 bits (196), Expect = 2e-15
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +3

Query: 228 PRFIWFGVPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRVKEGDPPTWP 377
           P+ +W  +P+ GF++GK LDD ET RMT FRDKSALFGG VK GDPP+WP
Sbjct: 10  PQLLWMLLPLAGFYLGKMLDDSETNRMTLFRDKSALFGGNVKPGDPPSWP 59


>UniRef50_Q9W3N7 Cluster: CG18624-PA, isoform A; n=5; Diptera|Rep:
           CG18624-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 56

 Score = 61.7 bits (143), Expect = 7e-09
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +3

Query: 213 IFGITPRFIWFGVPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRV-KEGDPPTW 374
           + G+  R +W  +P+ GF IG FLD +ET RMT FRDKSAL+G     EG  P+W
Sbjct: 2   VLGLDKRALWGALPLLGFAIGHFLDKKETERMTMFRDKSALYGRPAGSEGKAPSW 56


>UniRef50_Q4S729 Cluster: Chromosome 14 SCAF14723, whole genome
           shotgun sequence; n=7; Euteleostomi|Rep: Chromosome 14
           SCAF14723, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 58

 Score = 46.0 bits (104), Expect = 3e-04
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +3

Query: 249 VPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRVKEGDPPTW 374
           VPM GF IG +LD Q+  ++T+FR+KSAL+   +K G+  TW
Sbjct: 17  VPM-GFVIGWYLDRQQDKKLTAFRNKSALYSRELKPGEDVTW 57


>UniRef50_O75438 Cluster: NADH dehydrogenase [ubiquinone] 1 beta
           subcomplex subunit 1; n=7; Eutheria|Rep: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 -
           Homo sapiens (Human)
          Length = 58

 Score = 38.7 bits (86), Expect = 0.053
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = +3

Query: 249 VPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRVKEGDPPTW 374
           VPM GF IG +LD +   R+T+FR+KS LF   ++  +  TW
Sbjct: 17  VPM-GFVIGCYLDRKSDERLTAFRNKSMLFKRELQPSEEVTW 57


>UniRef50_Q02378 Cluster: NADH dehydrogenase [ubiquinone] 1 beta
           subcomplex subunit 1; n=5; Theria|Rep: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 -
           Bos taurus (Bovine)
          Length = 57

 Score = 36.7 bits (81), Expect = 0.21
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 249 VPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRVKEGDPPTW 374
           VPM GF  G +LD +   ++T+FR+KS L+   +K  +  TW
Sbjct: 16  VPM-GFVFGYYLDRKNDEKLTAFRNKSLLYKRELKPNEEVTW 56


>UniRef50_UPI0000E49973 Cluster: PREDICTED: similar to NADH
           dehydrogenase; n=2; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to NADH dehydrogenase -
           Strongylocentrotus purpuratus
          Length = 60

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = +3

Query: 213 IFGITPRFIWFGVPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRVKEGDPP 368
           +  +   + W  +      +G +LD Q+T+R + +++K+ L+   +K+G+ P
Sbjct: 2   VMQVLRNYWWAAITPAFALVGYYLDAQQTVRYSGWKNKTELYKRELKQGEDP 53


>UniRef50_A2FXE5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1002

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
 Frame = -2

Query: 271 MKNPVIGTPNQMKRGVMPKMAIL----YFDLLSFPLASVVPVKKNKRNAYGGKDYAHK 110
           +KN + G  N +KRG++P M  L    Y DL   PL ++ P+ +NK    GG D AH+
Sbjct: 301 IKNTINGIIN-IKRGLIPPMNDLGSYSYHDLFIAPLYALAPLYENK----GGADAAHR 353


>UniRef50_A6C605 Cluster: Putative uncharacterized protein; n=1;
            Planctomyces maris DSM 8797|Rep: Putative uncharacterized
            protein - Planctomyces maris DSM 8797
          Length = 1111

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -2

Query: 274  PMKNPVIGTPNQMKRGVMPKMAILYFDLLSFPLASVVPVKKNKRNAYG 131
            P+K   +  P+ +KRG    + I   D    P+A+V+PV+ +  +A G
Sbjct: 990  PIKRVAVDVPSALKRGEAGTVTIQVLDEQGAPVAAVIPVEVSIEDAEG 1037


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,498,143
Number of Sequences: 1657284
Number of extensions: 9122288
Number of successful extensions: 21296
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21292
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)