Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a15
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            26   0.28 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   8.1  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 422 PKVFSTFRLPTNDRFMASIGNGHVAANVFSDTVYMNG 532
           P++ S+F   + D+   + GNG++ +    D +  NG
Sbjct: 341 PRIMSSFDFQSKDQGPPNDGNGNILSPSIHDNICSNG 377


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 245 NEYRNSKYLSFIEQN 201
           N  +N+KYL  IE+N
Sbjct: 364 NHLKNAKYLDVIERN 378


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 245 NEYRNSKYLSFIEQN 201
           N  +N+KYL  IE+N
Sbjct: 364 NHLKNAKYLDVIERN 378


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 245 NEYRNSKYLSFIEQN 201
           N  +N+KYL  IE+N
Sbjct: 364 NHLKNAKYLDVIERN 378


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 126 TLELHIKIRNESNV 85
           T+ELHIK  ++S+V
Sbjct: 274 TMELHIKTHSDSSV 287


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 485 GHVAANVFSDTVYMNGLYNGNKG 553
           G +A  +F+D  Y     NG KG
Sbjct: 351 GIIAIGLFADNPYPLNTTNGRKG 373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,118
Number of Sequences: 438
Number of extensions: 3279
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)