Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a05
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   2.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   8.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   8.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    19   8.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    19   8.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +3

Query: 222 YNFE--HNKQLWLSSIKK 269
           Y FE  HNK+L  +S+KK
Sbjct: 795 YTFEQFHNKELLWTSVKK 812


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +3

Query: 222 YNFE--HNKQLWLSSIKK 269
           Y FE  HNK+L  +S+KK
Sbjct: 833 YTFEQFHNKELLWTSVKK 850


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 259 EDSHNCLLCSKL*KHLNFITIYQSYI 182
           E ++ CLLC K     N   +YQS++
Sbjct: 59  EKTYQCLLCQKAFDQKN---LYQSHL 81


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
 Frame = +1

Query: 190 IDKWL*NLNVFIILS-----TINNY 249
           ID W+ + +VF+ LS      +NNY
Sbjct: 276 IDVWMSSCSVFVFLSLMEFAVVNNY 300


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 184 YKIDKWL*NLN 216
           Y+ID W+ +LN
Sbjct: 541 YEIDNWMLDLN 551


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 184 YKIDKWL*NLN 216
           Y+ID W+ +LN
Sbjct: 541 YEIDNWMLDLN 551


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 11  NFNKINLYLDNYKIIK*ALNFV 76
           N N   LY +NYK +   +N++
Sbjct: 93  NNNYKKLYCNNYKKLYYNINYI 114


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 11  NFNKINLYLDNYKIIK*ALNFV 76
           N N   LY +NYK +   +N++
Sbjct: 93  NNNYKKLYCNNYKKLYYNINYI 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,708
Number of Sequences: 438
Number of extensions: 637
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)