Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a02
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           27   0.13 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.8  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 762 FQNYLTNRNIIADCALAVDSEHIYT 688
           +QNY TN  + +DC    ++EH YT
Sbjct: 16  YQNYKTNPFLASDCDKNQNTEHNYT 40


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 762 FQNYLTNRNIIADCALAVDSEHIYT 688
           +QNY TN  + +DC    ++E  YT
Sbjct: 16  YQNYKTNPFLASDCDKNQNTEQNYT 40


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 762 FQNYLTNRNIIADCALAVDSEHIYT 688
           +QNY TN  + +DC    ++E  YT
Sbjct: 16  YQNYKTNPFLASDCDKNQNTEQNYT 40


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 365 IRRVTKANAISKTCITSTL*QIVSFFPIVLPSARDMA 255
           IR+V    A++K  +          FPIVLP  +++A
Sbjct: 235 IRKVVDGMAMAKLNVLHLHLTDAVSFPIVLPKVQELA 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,649
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)