Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a01
         (787 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RL42 Cluster: Repeat organellar protein; n=3; Plasmod...    37   0.66 
UniRef50_Q4JB30 Cluster: Conserved brix domain protein; n=1; Sul...    36   1.5  

>UniRef50_Q7RL42 Cluster: Repeat organellar protein; n=3; Plasmodium
           (Vinckeia)|Rep: Repeat organellar protein - Plasmodium
           yoelii yoelii
          Length = 648

 Score = 36.7 bits (81), Expect = 0.66
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 777 ELSKRLFPCH*FFLETPHFYRYRNFSYHQYQYS*CKC 667
           ++SKR   CH +     H+Y Y  + YH Y Y  C C
Sbjct: 560 DISKRYHYCHCYHYYYYHYYYYHYYYYHYYHYYYCHC 596


>UniRef50_Q4JB30 Cluster: Conserved brix domain protein; n=1;
           Sulfolobus acidocaldarius|Rep: Conserved brix domain
           protein - Sulfolobus acidocaldarius
          Length = 199

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 678 MSIGIGGMRNCDTYKNGAFLEKISD 752
           M++G  G+ NC++Y NG ++EKI+D
Sbjct: 144 MNLGYTGVENCESYVNGRYIEKIND 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,366,820
Number of Sequences: 1657284
Number of extensions: 15623365
Number of successful extensions: 29967
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29954
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)