Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2a01
         (787 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1)                      30   2.4  

>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 673

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIFYK 42
           YNY  D +N +  +YN+YL ++ K
Sbjct: 588 YNYYLDVYNYYLDVYNYYLDVYNK 611



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 546 YNYYLDVYNYYLDIYNYYLDVY 567



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 553 YNYYLDIYNYYLDVYNYYLDVY 574



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 560 YNYYLDVYNYYLDVYNYYLDVY 581



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 567 YNYYLDVYNYYLDVYNYYLDVY 588



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 574 YNYYLDVYNYYLDVYNYYLDVY 595



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 581 YNYYLDVYNYYLDVYNYYLDVY 602


>SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1)
          Length = 122

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIFYK 42
           YNY  D +N +  +YN+YL ++ K
Sbjct: 72  YNYYLDVYNYYLDVYNYYLDVYNK 95



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 9   YNYYLDVYNYYLDIYNYYLDVY 30



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 16  YNYYLDIYNYYLDVYNYYLDVY 37



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 23  YNYYLDVYNYYLDVYNYYLDVY 44



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 30  YNYYLDVYNYYLDVYNYYLDVY 51



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 37  YNYYLDVYNYYLDVYNYYLDVY 58



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 44  YNYYLDVYNYYLDVYNYYLDVY 65



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 51  YNYYLDVYNYYLDVYNYYLDVY 72



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 58  YNYYLDVYNYYLDVYNYYLDVY 79



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 YNYIADSFNTFTPLYNFYLYIF 48
           YNY  D +N +  +YN+YL ++
Sbjct: 65  YNYYLDVYNYYLDVYNYYLDVY 86


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,403,674
Number of Sequences: 59808
Number of extensions: 494904
Number of successful extensions: 999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)